BLASTX nr result

ID: Atractylodes22_contig00014822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014822
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vin...   243   3e-62
ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|1...   239   7e-61
ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|2...   236   6e-60
gb|ABK96138.1| unknown [Populus trichocarpa]                          236   6e-60
ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucu...   231   2e-58

>ref|XP_002281228.1| PREDICTED: RNA-binding protein 8A [Vitis vinifera]
           gi|296088561|emb|CBI37552.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  243 bits (621), Expect = 3e-62
 Identities = 120/149 (80%), Positives = 136/149 (91%), Gaps = 1/149 (0%)
 Frame = +1

Query: 223 SSPRTSTPIPKLKSAITGGSVTVASSAPKKTKGRGFREETDAERNNRMSGR-FDSLDSDG 399
           SSPR   P+PKLKSAITGG+ +  ++APKKTKGRGFR++TDA+RN+R + R FDSLDSDG
Sbjct: 30  SSPRA--PLPKLKSAITGGAPSSLAAAPKKTKGRGFRDDTDADRNSRFAARDFDSLDSDG 87

Query: 400 GPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 579
           GPGP+RSIEGWIILVTGVHEEAQEDDLQNAFGEFGE+KNLHLNLDRRTGFVKGYALIEYE
Sbjct: 88  GPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEVKNLHLNLDRRTGFVKGYALIEYE 147

Query: 580 NFEEAEKAIAAMDGGELLTQTVYVDWAFS 666
           N EEA+ AI+AM+G ELLTQT+ VDWAFS
Sbjct: 148 NLEEAQAAISAMNGTELLTQTISVDWAFS 176


>ref|XP_002299789.1| predicted protein [Populus trichocarpa] gi|118484267|gb|ABK94013.1|
           unknown [Populus trichocarpa]
           gi|222847047|gb|EEE84594.1| predicted protein [Populus
           trichocarpa]
          Length = 205

 Score =  239 bits (610), Expect = 7e-61
 Identities = 119/149 (79%), Positives = 132/149 (88%), Gaps = 1/149 (0%)
 Frame = +1

Query: 223 SSPRTSTPIPKLKSAITGGSVTVASSAPKKTKGRGFREETDAERNNRMSGR-FDSLDSDG 399
           SSPR   P+PKLKSAITGGS + + SAPKKTKGRGFREE DAER +R+SGR FDSL SDG
Sbjct: 31  SSPRA--PLPKLKSAITGGSASSSLSAPKKTKGRGFREEVDAERQSRLSGRGFDSLGSDG 88

Query: 400 GPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 579
           GPGP+RS+EGWIILV+GVHEEAQ+D LQ AFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
Sbjct: 89  GPGPQRSVEGWIILVSGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 148

Query: 580 NFEEAEKAIAAMDGGELLTQTVYVDWAFS 666
            FE+AE AIA+M+GG LL Q +YVDWAFS
Sbjct: 149 KFEQAENAIASMNGGTLLEQIIYVDWAFS 177


>ref|XP_002314085.1| predicted protein [Populus trichocarpa] gi|222850493|gb|EEE88040.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  236 bits (602), Expect = 6e-60
 Identities = 118/149 (79%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
 Frame = +1

Query: 223 SSPRTSTPIPKLKSAITGGSVTVASSAPKKTKGRGFREETDAERNNRMSGR-FDSLDSDG 399
           SSPR   P+PKLKSAITGGS + + SAPKKTKGRGFREE D ER +R SGR FDSL SDG
Sbjct: 31  SSPRA--PLPKLKSAITGGSASPSLSAPKKTKGRGFREEVDTERQSRFSGRGFDSLGSDG 88

Query: 400 GPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 579
           GPGP+RS+EGWIILV+GVHEEAQ+D LQ AFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
Sbjct: 89  GPGPQRSVEGWIILVSGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 148

Query: 580 NFEEAEKAIAAMDGGELLTQTVYVDWAFS 666
           NFE+AE AIA+M+GG LL Q + VDWAFS
Sbjct: 149 NFEQAENAIASMNGGTLLEQVINVDWAFS 177


>gb|ABK96138.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  236 bits (602), Expect = 6e-60
 Identities = 118/149 (79%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
 Frame = +1

Query: 223 SSPRTSTPIPKLKSAITGGSVTVASSAPKKTKGRGFREETDAERNNRMSGR-FDSLDSDG 399
           SSPR   P+PKLKSAITGGS + + SAPKKTKGRGFREE D ER +R SGR FDSL SDG
Sbjct: 31  SSPRA--PLPKLKSAITGGSASPSLSAPKKTKGRGFREEVDTERQSRFSGRGFDSLGSDG 88

Query: 400 GPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 579
           GPGP+RS+EGWIILV+GVHEEAQ+D LQ AFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
Sbjct: 89  GPGPQRSVEGWIILVSGVHEEAQDDHLQEAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 148

Query: 580 NFEEAEKAIAAMDGGELLTQTVYVDWAFS 666
           NFE+AE AIA+M+GG LL Q + VDWAFS
Sbjct: 149 NFEQAENAIASMNGGTLLEQVINVDWAFS 177


>ref|XP_004139049.1| PREDICTED: RNA-binding protein 8A-like [Cucumis sativus]
          Length = 197

 Score =  231 bits (588), Expect = 2e-58
 Identities = 119/149 (79%), Positives = 129/149 (86%), Gaps = 1/149 (0%)
 Frame = +1

Query: 223 SSPRTSTPIPKLKSAITGGSVTVASSAPKKTKGRGFREETDAERNNRMSGR-FDSLDSDG 399
           +SPR   P PKLKSAITGG+ +  S  PKKTKGRGFREE+D  RN R++G  FDSL S  
Sbjct: 29  ASPRA--PFPKLKSAITGGASSSLSGGPKKTKGRGFREESD--RNTRLAGSDFDSLKSAD 84

Query: 400 GPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 579
           GPGP+RSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
Sbjct: 85  GPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE 144

Query: 580 NFEEAEKAIAAMDGGELLTQTVYVDWAFS 666
           +FEEAEKAI+AMDG ELLTQ + VDWAFS
Sbjct: 145 SFEEAEKAISAMDGAELLTQIINVDWAFS 173


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