BLASTX nr result

ID: Atractylodes22_contig00014796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014796
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|2...    72   9e-11
ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...    65   2e-10
ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-09
gb|AFK36513.1| unknown [Medicago truncatula]                           65   1e-08
gb|AFK35607.1| unknown [Lotus japonicus]                               65   1e-08

>ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|222868776|gb|EEF05907.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -3

Query: 376 ITARPKKYTRDPDDGRQRFLLELEFVQCLANPTYIH*VDTDINFIFRRTTGILG*NIYYQ 197
           I +RPKK  +DPDDGRQRFLLELEFVQCLANPTYIH +  +  F      G L   +Y+Q
Sbjct: 2   IISRPKKIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLLYWQ 61

Query: 196 GP 191
            P
Sbjct: 62  RP 63


>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score = 64.7 bits (156), Expect(2) = 2e-10
 Identities = 34/58 (58%), Positives = 38/58 (65%)
 Frame = -3

Query: 364 PKKYTRDPDDGRQRFLLELEFVQCLANPTYIH*VDTDINFIFRRTTGILG*NIYYQGP 191
           PK   +DPDDGRQRFLLELEFVQCLANPTYIH +  +  F      G L    Y+Q P
Sbjct: 17  PKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQQP 74



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 413 MASGQETDDSSYNHSSPKKVYK 348
           M SG+E+D ++   +SPK VYK
Sbjct: 1   MDSGKESDSAADTPTSPKNVYK 22



 Score = 40.8 bits (94), Expect(2) = 6e-06
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -2

Query: 260 HRHQFYF*KNYRNTRLKHILPR 195
           HR QF++ KNYRN RLKHILP+
Sbjct: 111 HRQQFFYWKNYRNNRLKHILPK 132



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = -1

Query: 75  QYGVPSGSPLPKNHPR-SGLDRRKRK 1
           QYG+P+GS L KN  R S +DRRKRK
Sbjct: 170 QYGIPAGSSLSKNDMRNSAIDRRKRK 195


>ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|222832585|gb|EEE71062.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 35/58 (60%), Positives = 39/58 (67%)
 Frame = -3

Query: 364 PKKYTRDPDDGRQRFLLELEFVQCLANPTYIH*VDTDINFIFRRTTGILG*NIYYQGP 191
           PKK  +DPDDGRQRFLLELEFVQCLANPTYIH +  +  F      G L    Y+Q P
Sbjct: 1   PKKIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRP 58


>gb|AFK36513.1| unknown [Medicago truncatula]
          Length = 204

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/58 (58%), Positives = 38/58 (65%)
 Frame = -3

Query: 364 PKKYTRDPDDGRQRFLLELEFVQCLANPTYIH*VDTDINFIFRRTTGILG*NIYYQGP 191
           PK   +DPDDGRQRFLLELEFVQCLANPTYIH +  +  F      G L    Y+Q P
Sbjct: 18  PKSIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRP 75


>gb|AFK35607.1| unknown [Lotus japonicus]
          Length = 206

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 34/58 (58%), Positives = 38/58 (65%)
 Frame = -3

Query: 364 PKKYTRDPDDGRQRFLLELEFVQCLANPTYIH*VDTDINFIFRRTTGILG*NIYYQGP 191
           PK   +DPDDGRQRFLLELEFVQCLANPTYIH +  +  F      G L    Y+Q P
Sbjct: 18  PKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRP 75


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