BLASTX nr result

ID: Atractylodes22_contig00014698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014698
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis tha...   130   5e-28
ref|NP_196482.2| GTP-binding protein LepA [Arabidopsis thaliana]...   130   8e-28
dbj|BAB10014.1| GTP-binding protein LepA homolog [Arabidopsis th...   130   8e-28
ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, ...   129   1e-27
ref|XP_002873375.1| hypothetical protein ARALYDRAFT_487706 [Arab...   129   1e-27

>gb|AAM12957.1| GTP-binding protein LepA homolog [Arabidopsis thaliana]
           gi|22136082|gb|AAM91119.1| GTP-binding protein LepA-like
           protein [Arabidopsis thaliana]
          Length = 681

 Score =  130 bits (328), Expect = 5e-28
 Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
 Frame = -2

Query: 861 VPIFDHVRLAGKETTSCGGTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQ 682
           +P+ + + L G E        P   + E+EE IG+DC   I+CSAKE   + ++L+A VQ
Sbjct: 208 IPVLNKIDLPGAE--------PEKVLREIEEVIGLDCSKAIFCSAKEGIGITEILDAIVQ 259

Query: 681 RIPLSLEAARRPVRVVILDSYQGTYRGIIAYFCIIDEAIEEGERILFMAGGKDNFEDEIR 502
           RIP  L+ A +P+R +I DSY   YRG+I YF +ID  +++G+RI FMA GKD F DE+ 
Sbjct: 260 RIPAPLDTAGKPLRAIIFDSYYDPYRGVIVYFRVIDGKVKKGDRIFFMASGKDYFADEVG 319

Query: 501 ALYLNQLQVEE-YVGEMGCRSGSLRSAAYAR 412
            L  NQ+QV+E Y GE+G  + S+RS A AR
Sbjct: 320 VLSPNQIQVDELYAGEVGYIAASVRSVADAR 350


>ref|NP_196482.2| GTP-binding protein LepA [Arabidopsis thaliana]
           gi|317411756|sp|Q9FNM5.2|GUFP_ARATH RecName:
           Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|332003951|gb|AED91334.1| GTP-binding protein LepA
           [Arabidopsis thaliana]
          Length = 681

 Score =  130 bits (326), Expect = 8e-28
 Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
 Frame = -2

Query: 861 VPIFDHVRLAGKETTSCGGTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQ 682
           +P+ + + L G E        P   + E+EE IG+DC   I+CSAKE   + ++L+A VQ
Sbjct: 208 IPVLNKIDLPGAE--------PEKVLREIEEVIGLDCSKAIFCSAKEGIGITEILDAIVQ 259

Query: 681 RIPLSLEAARRPVRVVILDSYQGTYRGIIAYFCIIDEAIEEGERILFMAGGKDNFEDEIR 502
           RIP  L+ A +P+R +I DSY   YRG+I YF +ID  +++G+RI FMA GKD F DE+ 
Sbjct: 260 RIPAPLDTAGKPLRALIFDSYYDPYRGVIVYFRVIDGKVKKGDRIFFMASGKDYFADEVG 319

Query: 501 ALYLNQLQVEE-YVGEMGCRSGSLRSAAYAR 412
            L  NQ+QV+E Y GE+G  + S+RS A AR
Sbjct: 320 VLSPNQIQVDELYAGEVGYIAASVRSVADAR 350


>dbj|BAB10014.1| GTP-binding protein LepA homolog [Arabidopsis thaliana]
          Length = 675

 Score =  130 bits (326), Expect = 8e-28
 Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
 Frame = -2

Query: 861 VPIFDHVRLAGKETTSCGGTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQ 682
           +P+ + + L G E        P   + E+EE IG+DC   I+CSAKE   + ++L+A VQ
Sbjct: 202 IPVLNKIDLPGAE--------PEKVLREIEEVIGLDCSKAIFCSAKEGIGITEILDAIVQ 253

Query: 681 RIPLSLEAARRPVRVVILDSYQGTYRGIIAYFCIIDEAIEEGERILFMAGGKDNFEDEIR 502
           RIP  L+ A +P+R +I DSY   YRG+I YF +ID  +++G+RI FMA GKD F DE+ 
Sbjct: 254 RIPAPLDTAGKPLRALIFDSYYDPYRGVIVYFRVIDGKVKKGDRIFFMASGKDYFADEVG 313

Query: 501 ALYLNQLQVEE-YVGEMGCRSGSLRSAAYAR 412
            L  NQ+QV+E Y GE+G  + S+RS A AR
Sbjct: 314 VLSPNQIQVDELYAGEVGYIAASVRSVADAR 344


>ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Glycine max]
          Length = 687

 Score =  129 bits (324), Expect = 1e-27
 Identities = 70/151 (46%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
 Frame = -2

Query: 861 VPIFDHVRLAGKETTSCGGTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQ 682
           +P+ + + L G E        P+  I E+EE +G+DC N I CSAKE   + ++LNA V 
Sbjct: 214 IPVLNKIDLPGAE--------PDRVIKEIEEIVGLDCSNAILCSAKEGIGIIEILNAIVA 265

Query: 681 RIPLSLEAARRPVRVVILDSYQGTYRGIIAYFCIIDEAIEEGERILFMAGGKDNFEDEIR 502
           RIP   + ++RP+R +I DSY   YRG+I YF ++D  I++G+R+ FMA GKD F DEI 
Sbjct: 266 RIPPPEDTSKRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIG 325

Query: 501 ALYLNQLQVEE-YVGEMGCRSGSLRSAAYAR 412
            L  +QLQVEE Y GE+G  S S+R+ A AR
Sbjct: 326 VLSPSQLQVEELYAGEVGYLSASIRTVADAR 356


>ref|XP_002873375.1| hypothetical protein ARALYDRAFT_487706 [Arabidopsis lyrata subsp.
           lyrata] gi|297319212|gb|EFH49634.1| hypothetical protein
           ARALYDRAFT_487706 [Arabidopsis lyrata subsp. lyrata]
          Length = 680

 Score =  129 bits (324), Expect = 1e-27
 Identities = 69/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = -2

Query: 861 VPIFDHVRLAGKETTSCGGTGPNCFILEVEEDIGMDCINVIYCSAKEDRVMKKMLNANVQ 682
           +P+ + + L G E        P   + E+EE IG+DC   I+CSAKE   + ++L+A VQ
Sbjct: 207 IPVLNKIDLPGAE--------PEKVLREIEEVIGLDCSKAIFCSAKEGIGITEILDAIVQ 258

Query: 681 RIPLSLEAARRPVRVVILDSYQGTYRGIIAYFCIIDEAIEEGERILFMAGGKDNFEDEIR 502
           RIP  L+ A  P+R +I DSY   YRG+I YF +ID  +++G+RI FMA GKD F DE+ 
Sbjct: 259 RIPAPLDTAGNPLRALIFDSYYDPYRGVIVYFRVIDGKVKKGDRIFFMASGKDYFADEVG 318

Query: 501 ALYLNQLQVEE-YVGEMGCRSGSLRSAAYAR 412
            L  NQ+QV+E Y GE+G  + S+RS A AR
Sbjct: 319 VLSPNQIQVDELYAGEVGYIAASVRSVADAR 349


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