BLASTX nr result

ID: Atractylodes22_contig00014664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014664
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containin...   278   2e-72
emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]   278   2e-72
ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containin...   265   2e-68
ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containin...   264   3e-68
ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containin...   259   7e-67

>ref|XP_002275926.1| PREDICTED: zinc finger CCCH domain-containing protein 20 [Vitis
            vinifera]
          Length = 379

 Score =  278 bits (711), Expect = 2e-72
 Identities = 174/390 (44%), Positives = 203/390 (52%), Gaps = 78/390 (20%)
 Frame = -2

Query: 1113 DPTVRSGQWDTILEDPAANAHSPFSCSFMN-----------DDDQVMFEQLTTRQLRHLC 967
            +PTV+   WD   +DP A   SPF  S +N           D +  +  +  +   R+L 
Sbjct: 10   NPTVQVPPWDPY-DDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFSSLQRYLP 68

Query: 966  SNLXXXXXXXXXXXXXXXXXVQVDDQFRMYEFKVKRCGRGRSHDWTDCPYAHPGXXXXXX 787
            SN                      DQFRM+EFKV+RC RGRSHDWT+CPY          
Sbjct: 69   SNEFGTESGDESETVVDAFSC---DQFRMFEFKVRRCARGRSHDWTECPY---------- 115

Query: 786  XXXXXXXXXXXXXXCPYAHPGEKARRRDPRKFHYSGNPCPEFRKGSCKKGDTCEFAHGVF 607
                             AHPGEKARRRDPRKFHYSG  CPEFRKG+CKKGD+CEFAHGVF
Sbjct: 116  -----------------AHPGEKARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVF 158

Query: 606  ECWLHPSRYRTQPCKDGVQCSRRICFFAHTPEQLRILPAS---HHVSTHPESYDGSPSRL 436
            ECWLHP+RYRTQPCKDG  C RR+CFFAHTPEQLR+LP     +H S   ESYDGSP RL
Sbjct: 159  ECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSA--ESYDGSPLRL 216

Query: 435  -----LQLG---SSPTSTLHLSHCSTPTDSPPMSPVS--------SVGDLALTMRNLQIG 304
                 L  G   SSPTSTL     S P+DSPPMSP S        S+ +L  +MRNLQ+G
Sbjct: 217  AFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVG 276

Query: 303  KATRLSMSVMSPSVWG-------------------------------------------- 256
            KA       MSP  WG                                            
Sbjct: 277  KAK------MSPQSWGVQMGSGFGSPRGSTLRPGFCSLPSTPTRTPARSGLGGLDVWDKT 330

Query: 255  ----GAMERVESGKGVRAQIYAKLSRENSV 178
                 AMERVESG+ +RA+IYAK+S+ENS+
Sbjct: 331  CEEEPAMERVESGRDLRARIYAKISKENSL 360


>emb|CAN83255.1| hypothetical protein VITISV_036981 [Vitis vinifera]
          Length = 426

 Score =  278 bits (711), Expect = 2e-72
 Identities = 174/390 (44%), Positives = 203/390 (52%), Gaps = 78/390 (20%)
 Frame = -2

Query: 1113 DPTVRSGQWDTILEDPAANAHSPFSCSFMN-----------DDDQVMFEQLTTRQLRHLC 967
            +PTV+   WD   +DP A   SPF  S +N           D +  +  +  +   R+L 
Sbjct: 57   NPTVQVPPWDPY-DDPTAGMGSPFPVSGVNFNGNAASPTGGDYNPFIISEAFSSLQRYLP 115

Query: 966  SNLXXXXXXXXXXXXXXXXXVQVDDQFRMYEFKVKRCGRGRSHDWTDCPYAHPGXXXXXX 787
            SN                      DQFRM+EFKV+RC RGRSHDWT+CPY          
Sbjct: 116  SNEFGTESGDESETVVDAFSC---DQFRMFEFKVRRCARGRSHDWTECPY---------- 162

Query: 786  XXXXXXXXXXXXXXCPYAHPGEKARRRDPRKFHYSGNPCPEFRKGSCKKGDTCEFAHGVF 607
                             AHPGEKARRRDPRKFHYSG  CPEFRKG+CKKGD+CEFAHGVF
Sbjct: 163  -----------------AHPGEKARRRDPRKFHYSGTACPEFRKGNCKKGDSCEFAHGVF 205

Query: 606  ECWLHPSRYRTQPCKDGVQCSRRICFFAHTPEQLRILPAS---HHVSTHPESYDGSPSRL 436
            ECWLHP+RYRTQPCKDG  C RR+CFFAHTPEQLR+LP     +H S   ESYDGSP RL
Sbjct: 206  ECWLHPARYRTQPCKDGSGCRRRVCFFAHTPEQLRVLPQQSPRNHGSA--ESYDGSPLRL 263

Query: 435  -----LQLG---SSPTSTLHLSHCSTPTDSPPMSPVS--------SVGDLALTMRNLQIG 304
                 L  G   SSPTSTL     S P+DSPPMSP S        S+ +L  +MRNLQ+G
Sbjct: 264  AFDPYLSKGSFISSPTSTLISPPVSPPSDSPPMSPNSPSFTGSFNSMSELVASMRNLQVG 323

Query: 303  KATRLSMSVMSPSVWG-------------------------------------------- 256
            KA       MSP  WG                                            
Sbjct: 324  KAK------MSPQSWGVQMGSGFGSPRGSTLRPGFCSLPSTPTRTPARSGLGGLDVWDKT 377

Query: 255  ----GAMERVESGKGVRAQIYAKLSRENSV 178
                 AMERVESG+ +RA+IYAK+S+ENS+
Sbjct: 378  CEEEPAMERVESGRDLRARIYAKISKENSL 407


>ref|XP_004141305.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Cucumis sativus] gi|449521397|ref|XP_004167716.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           49-like [Cucumis sativus]
          Length = 349

 Score =  265 bits (677), Expect = 2e-68
 Identities = 144/286 (50%), Positives = 173/286 (60%), Gaps = 45/286 (15%)
 Frame = -2

Query: 894 DQFRMYEFKVKRCGRGRSHDWTDCPYAHPGXXXXXXXXXXXXXXXXXXXXCPYAHPGEKA 715
           D FRM+EFK++RC RGRSHDWT+CPY                           AHPGEKA
Sbjct: 75  DHFRMFEFKIRRCARGRSHDWTECPY---------------------------AHPGEKA 107

Query: 714 RRRDPRKFHYSGNPCPEFRKGSCKKGDTCEFAHGVFECWLHPSRYRTQPCKDGVQCSRRI 535
           RRRDPRK+HYSG  CPEFRKG+CKKGD+C+FAHG+FECWLHP+RYRTQPCKDG+ C RR+
Sbjct: 108 RRRDPRKYHYSGTACPEFRKGNCKKGDSCDFAHGIFECWLHPARYRTQPCKDGLACRRRV 167

Query: 534 CFFAHTPEQLRILP-ASHHVSTHPESYDGSPSRLL----------QLGSSPTSTLHLSHC 388
           CFFAHTPEQLR+LP  S       +S DGS SR+              +SPTS L     
Sbjct: 168 CFFAHTPEQLRVLPQQSPRTPVSADSVDGS-SRIAHAFDSYFSKGSFVTSPTSILSTPPV 226

Query: 387 STPTDSPPMS---PVSSVGDLALTMRNLQIGK--------ATRLSMSVMSPS-------- 265
           S P+DSPP+S   P +SV  L   MRNLQ+GK          +L  + +SPS        
Sbjct: 227 SPPSDSPPLSPNCPFNSVNGLVSCMRNLQLGKLKATPHWGRIQLGQNPLSPSSSGLYNLP 286

Query: 264 ---------VWG------GAMERVESGKGVRAQIYAKLSRENSVSE 172
                    +WG       AMERVESG+ +RAQ+YAKLS++NSV E
Sbjct: 287 STPTTGNYELWGKNYEEEPAMERVESGRDLRAQMYAKLSKDNSVKE 332


>ref|XP_003529068.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like isoform
            1 [Glycine max] gi|356520842|ref|XP_003529069.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            20-like isoform 2 [Glycine max]
          Length = 359

 Score =  264 bits (674), Expect = 3e-68
 Identities = 159/364 (43%), Positives = 197/364 (54%), Gaps = 52/364 (14%)
 Frame = -2

Query: 1113 DPTVRSGQWDTILEDPAANAHSPFSCSFMNDDDQVMF---EQLTTRQLRHLCSNLXXXXX 943
            +PTV    W T  +DP A  +S F  + +N  +   +   E LT  Q R L SN      
Sbjct: 10   NPTVHVPPWPTH-DDPTAEMYSAFLTNDVNAGEYSPYYLQEALTALQ-RFLPSNETDADS 67

Query: 942  XXXXXXXXXXXXVQVDDQFRMYEFKVKRCGRGRSHDWTDCPYAHPGXXXXXXXXXXXXXX 763
                           D  FRMYEFKV+RC RGRSHDWT+CPY                  
Sbjct: 68   DTEAQPDAAVDAYSCD-HFRMYEFKVRRCARGRSHDWTECPY------------------ 108

Query: 762  XXXXXXCPYAHPGEKARRRDPRKFHYSGNPCPEFRKGSCKKGDTCEFAHGVFECWLHPSR 583
                     AHPGEKARRRDPRKFHYSG  CPEFRKG+CKKGDTCEFAHGVFECWLHP+R
Sbjct: 109  ---------AHPGEKARRRDPRKFHYSGAACPEFRKGNCKKGDTCEFAHGVFECWLHPAR 159

Query: 582  YRTQPCKDGVQCSRRICFFAHTPEQLRILP--ASHHVSTHPESYDGSPSRLLQ----LGS 421
            YRTQPCKDG  C RR+CFFAHTPEQLR+LP  +    +   ESYDGSP R +       S
Sbjct: 160  YRTQPCKDGTSCRRRVCFFAHTPEQLRVLPMQSPRSAANSSESYDGSPMRQMMSPAAFMS 219

Query: 420  SPTSTLHLSHCSTPTDSPPMSPVSSVGDLALTMRNLQIGKATRL----SMSVMSP----- 268
            SP ++L      +P +SPP+SP  S+ ++  ++RNLQ+GK   +    ++SV SP     
Sbjct: 220  SPAASL------SPPESPPVSP--SINEMVASLRNLQLGKMKSMPQSRNVSVGSPGYGSP 271

Query: 267  ----------------------------SVWGGA------MERVESGKGVRAQIYAKLSR 190
                                          W  +      MERVESG+G+RA+++ KLS+
Sbjct: 272  RGSVLRPGFCSLPTTPTQQPVRSGVNCFDFWDQSCEEEPVMERVESGRGIRAKMFEKLSK 331

Query: 189  ENSV 178
            ENS+
Sbjct: 332  ENSL 335


>ref|XP_003516267.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
            [Glycine max]
          Length = 350

 Score =  259 bits (663), Expect = 7e-67
 Identities = 156/356 (43%), Positives = 194/356 (54%), Gaps = 44/356 (12%)
 Frame = -2

Query: 1113 DPTVRSGQWDTILEDPAANAHSPFSCSFMNDDDQVMF---EQLTTRQLRHLCSN-LXXXX 946
            +PTV    W    +DP A  +S F  + +N  +   +   E LT  Q R L SN      
Sbjct: 10   NPTVLVPPWPAH-DDPTAEMYSAFLTNDVNAGEYSPYHLQEALTALQ-RFLPSNETDADS 67

Query: 945  XXXXXXXXXXXXXVQVDDQFRMYEFKVKRCGRGRSHDWTDCPYAHPGXXXXXXXXXXXXX 766
                             D FRMYEFKV+RC RGRSHDWT+CPY                 
Sbjct: 68   DSSEAAQPDAAVDAYTCDHFRMYEFKVRRCARGRSHDWTECPY----------------- 110

Query: 765  XXXXXXXCPYAHPGEKARRRDPRKFHYSGNPCPEFRKGSCKKGDTCEFAHGVFECWLHPS 586
                      AHPGEKARRRDPR+FHYSG  CPEFRKG+C+KGD CEFAHGVFECWLHP+
Sbjct: 111  ----------AHPGEKARRRDPRRFHYSGVACPEFRKGNCRKGDACEFAHGVFECWLHPA 160

Query: 585  RYRTQPCKDGVQCSRRICFFAHTPEQLRILP--ASHHVSTHPESYDGSPSRLLQLGSSPT 412
            RYRTQPCKDG  C RR+CFFAHTPEQLR+LP  +   V+   ESYDGSP R + L S+  
Sbjct: 161  RYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPMQSPRSVANSSESYDGSPMRQVSLSSAAA 220

Query: 411  STLHLSHCSTPTDSPPMSPVSSVGDLALTMRNLQIGKATRL----SMSVMSP-------- 268
            +    S  ++   SPP SP  SV ++  ++RNLQ+GK   +    ++SV SP        
Sbjct: 221  AAFMSSPAASL--SPPESP-PSVNEMVASLRNLQLGKMKSMPHNRNVSVGSPRGSVLRPG 277

Query: 267  --------------------SVWGGA------MERVESGKGVRAQIYAKLSRENSV 178
                                 VW  +      MERVESG+G+RA+++ KLS+ENS+
Sbjct: 278  FLSLPTTPTQQPVRSGVKCFDVWDESFEEEPVMERVESGRGIRAKMFEKLSKENSL 333


Top