BLASTX nr result

ID: Atractylodes22_contig00014544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014544
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241...   113   4e-23
emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]   113   4e-23
ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216...   109   8e-22
pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 3...   109   8e-22
ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|1...   107   4e-21

>ref|XP_002268728.1| PREDICTED: uncharacterized protein LOC100241260 [Vitis vinifera]
          Length = 188

 Score =  113 bits (283), Expect = 4e-23
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = -2

Query: 559 DLMSVVCPSLAYANTLYFRSAYNVQVIVEDNEPEEKLLGRFRREVMKAGVIQECKRRRYF 380
           DLM+VVCPSLAY+NTL+F+SAYNVQVIVEDNEPEEKLL RFRREVM+AGVIQECKRRR+F
Sbjct: 71  DLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRFF 130


>emb|CAN82190.1| hypothetical protein VITISV_031115 [Vitis vinifera]
          Length = 188

 Score =  113 bits (283), Expect = 4e-23
 Identities = 53/60 (88%), Positives = 59/60 (98%)
 Frame = -2

Query: 559 DLMSVVCPSLAYANTLYFRSAYNVQVIVEDNEPEEKLLGRFRREVMKAGVIQECKRRRYF 380
           DLM+VVCPSLAY+NTL+F+SAYNVQVIVEDNEPEEKLL RFRREVM+AGVIQECKRRR+F
Sbjct: 71  DLMAVVCPSLAYSNTLFFKSAYNVQVIVEDNEPEEKLLNRFRREVMRAGVIQECKRRRFF 130


>ref|XP_004145671.1| PREDICTED: uncharacterized protein LOC101216973 [Cucumis sativus]
           gi|449523367|ref|XP_004168695.1| PREDICTED:
           uncharacterized protein LOC101228071 [Cucumis sativus]
          Length = 183

 Score =  109 bits (272), Expect = 8e-22
 Identities = 49/60 (81%), Positives = 58/60 (96%)
 Frame = -2

Query: 559 DLMSVVCPSLAYANTLYFRSAYNVQVIVEDNEPEEKLLGRFRREVMKAGVIQECKRRRYF 380
           +L SV+CPSLAYANT++FRSAYNVQV+V+DNEPEE+LL RFRREVM+AGVIQECKRRR+F
Sbjct: 67  ELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFF 126


>pdb|3BBN|U Chain U, Homology Model For The Spinach Chloroplast 30s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|17154781|gb|AAL35983.1|AF104396_1 ribosome-like
           protein [Cucumis sativus]
          Length = 190

 Score =  109 bits (272), Expect = 8e-22
 Identities = 49/60 (81%), Positives = 58/60 (96%)
 Frame = -2

Query: 559 DLMSVVCPSLAYANTLYFRSAYNVQVIVEDNEPEEKLLGRFRREVMKAGVIQECKRRRYF 380
           +L SV+CPSLAYANT++FRSAYNVQV+V+DNEPEE+LL RFRREVM+AGVIQECKRRR+F
Sbjct: 74  ELASVICPSLAYANTMFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFF 133


>ref|XP_002300102.1| predicted protein [Populus trichocarpa] gi|118487561|gb|ABK95607.1|
           unknown [Populus trichocarpa]
           gi|222847360|gb|EEE84907.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  107 bits (266), Expect = 4e-21
 Identities = 49/59 (83%), Positives = 57/59 (96%)
 Frame = -2

Query: 559 DLMSVVCPSLAYANTLYFRSAYNVQVIVEDNEPEEKLLGRFRREVMKAGVIQECKRRRY 383
           +L SVVCPSLAY+NTL+F+SAYNVQV+VEDNEPEE+LL RFRREVM+AGVIQECKRRR+
Sbjct: 60  ELSSVVCPSLAYSNTLFFKSAYNVQVVVEDNEPEERLLNRFRREVMRAGVIQECKRRRF 118


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