BLASTX nr result

ID: Atractylodes22_contig00014531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014531
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA27079.1| TO119-1rc [Taraxacum officinale]                       153   2e-35
gb|AAK77856.1|AF362737_1 succinate dehydrogenase subunit 4 [Gymn...    87   1e-15
gb|ADT65356.1| succinate dehydrogenase subunit 4 (mitochondrion)...    87   2e-15
ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochond...    87   3e-15
gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoi...    87   3e-15

>gb|ABA27079.1| TO119-1rc [Taraxacum officinale]
          Length = 108

 Score =  153 bits (387), Expect = 2e-35
 Identities = 76/119 (63%), Positives = 88/119 (73%)
 Frame = +1

Query: 136 DFPTQKWIRSSSSYSEPAVRGDMNEPIAQIQTNKGIAEIEKTINSSTKRTHNGPAYFTAS 315
           DF T KWIRS SS++E  V G ++EPI+Q+Q N+              R  N P YFTAS
Sbjct: 3   DFSTPKWIRSFSSHTESGVSGHISEPISQVQANQ-------------VRAQNAPGYFTAS 49

Query: 316 GAAVGSILSAPIVNAPQAAKLGMGSTVSSTFLPNLALFWHMNNGIEEILADYVHHEMTR 492
           GA VGS+LS PIVNAPQAAKLG+G+T +STFLPNLA FWH+NNGIEEILADYVHHEM R
Sbjct: 50  GAVVGSLLSVPIVNAPQAAKLGLGATATSTFLPNLATFWHINNGIEEILADYVHHEMIR 108


>gb|AAK77856.1|AF362737_1 succinate dehydrogenase subunit 4 [Gymnocladus dioicus]
          Length = 100

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = +1

Query: 394 VSSTFLPNLALFWHMNNGIEEILADYVHHEMTRSLILVLMRIFLIIAAKDVFVA 555
           VSSTFLPNL+LFWH+N GIEEI+ADYVH EMTR+LILV +R+F +I  KDVF++
Sbjct: 39  VSSTFLPNLSLFWHINEGIEEIMADYVHQEMTRNLILVYLRLFFLIVIKDVFLS 92


>gb|ADT65356.1| succinate dehydrogenase subunit 4 (mitochondrion) [Antirrhinum
           majus] gi|314998886|gb|ADT65357.1| succinate
           dehydrogenase subunit 4 [Antirrhinum majus]
          Length = 155

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 39/54 (72%), Positives = 49/54 (90%)
 Frame = +1

Query: 394 VSSTFLPNLALFWHMNNGIEEILADYVHHEMTRSLILVLMRIFLIIAAKDVFVA 555
           VSSTFLPNL+LFWH+N GIEEI+AD+VH EMTR+LILV +R+FL+I  KDVF++
Sbjct: 62  VSSTFLPNLSLFWHINEGIEEIMADHVHQEMTRNLILVYLRLFLLIVIKDVFLS 115


>ref|YP_004237273.1| succinate dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis] gi|322394280|gb|ADW96037.1| succinate
           dehydrogenase subunit 4 (mitochondrion) [Ricinus
           communis]
          Length = 130

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = +1

Query: 394 VSSTFLPNLALFWHMNNGIEEILADYVHHEMTRSLILVLMRIFLIIAAKDVFVA 555
           VSSTFLPNL+LFWH+N GIEEI+ADYVH EMTR+ ILV +R+FL+I  KDVF++
Sbjct: 62  VSSTFLPNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 115


>gb|ABD24436.1| succinate dehydrogenase subunit 4 [Populus deltoides]
           gi|87133590|gb|ABD24437.1| succinate dehydrogenase
           subunit 4 [Populus nigra] gi|87133592|gb|ABD24438.1|
           succinate dehydrogenase subunit 4 [Populus tremuloides]
          Length = 106

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = +1

Query: 394 VSSTFLPNLALFWHMNNGIEEILADYVHHEMTRSLILVLMRIFLIIAAKDVFVA 555
           VSSTFLPNL+LFWH+N GIEEI+ADYVH EMTR+ ILV +R+FL+I  KDVF++
Sbjct: 39  VSSTFLPNLSLFWHINEGIEEIMADYVHQEMTRNWILVYLRLFLLIVIKDVFLS 92


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