BLASTX nr result

ID: Atractylodes22_contig00014522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014522
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...    46   9e-09
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...    46   9e-09
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...    46   9e-09
ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, pa...    46   1e-08
emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]    46   1e-08

>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
           [Vitis vinifera]
          Length = 1316

 Score = 45.8 bits (107), Expect(2) = 9e-09
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 624 SKMEYKAIESVLQTINPHTGE 562
           SKMEYKAIESVLQTINPHTGE
Sbjct: 106 SKMEYKAIESVLQTINPHTGE 126



 Score = 40.0 bits (92), Expect(2) = 9e-09
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = -3

Query: 724 G*SKKTGNGCLKLSCTSELPRHARSGHSLI 635
           G  K T   CLKLSCT ELP +ARSGHS I
Sbjct: 37  GAGKTTIIECLKLSCTGELPPNARSGHSFI 66


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score = 45.8 bits (107), Expect(2) = 9e-09
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 624 SKMEYKAIESVLQTINPHTGE 562
           SKMEYKAIESVLQTINPHTGE
Sbjct: 106 SKMEYKAIESVLQTINPHTGE 126



 Score = 40.0 bits (92), Expect(2) = 9e-09
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = -3

Query: 724 G*SKKTGNGCLKLSCTSELPRHARSGHSLI 635
           G  K T   CLKLSCT ELP +ARSGHS I
Sbjct: 37  GAGKTTIIECLKLSCTGELPPNARSGHSFI 66


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1256

 Score = 45.8 bits (107), Expect(2) = 9e-09
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 624 SKMEYKAIESVLQTINPHTGE 562
           SKMEYKAIESVLQTINPHTGE
Sbjct: 106 SKMEYKAIESVLQTINPHTGE 126



 Score = 40.0 bits (92), Expect(2) = 9e-09
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = -3

Query: 724 G*SKKTGNGCLKLSCTSELPRHARSGHSLI 635
           G  K T   CLKLSCT ELP +ARSGHS I
Sbjct: 37  GAGKTTIIECLKLSCTGELPPNARSGHSFI 66


>ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 299

 Score = 45.8 bits (107), Expect(2) = 1e-08
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 624 SKMEYKAIESVLQTINPHTGE 562
           SKMEYKAIESVLQTINPHTGE
Sbjct: 106 SKMEYKAIESVLQTINPHTGE 126



 Score = 40.0 bits (92), Expect(2) = 1e-08
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = -3

Query: 724 G*SKKTGNGCLKLSCTSELPRHARSGHSLI 635
           G  K T   CLKLSCT ELP +ARSGHS I
Sbjct: 37  GAGKTTIIECLKLSCTGELPPNARSGHSFI 66


>emb|CAN72711.1| hypothetical protein VITISV_018097 [Vitis vinifera]
          Length = 244

 Score = 45.8 bits (107), Expect(2) = 1e-08
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 624 SKMEYKAIESVLQTINPHTGE 562
           SKMEYKAIESVLQTINPHTGE
Sbjct: 106 SKMEYKAIESVLQTINPHTGE 126



 Score = 40.0 bits (92), Expect(2) = 1e-08
 Identities = 20/30 (66%), Positives = 21/30 (70%)
 Frame = -3

Query: 724 G*SKKTGNGCLKLSCTSELPRHARSGHSLI 635
           G  K T   CLKLSCT ELP +ARSGHS I
Sbjct: 37  GAGKTTIIECLKLSCTGELPPNARSGHSFI 66