BLASTX nr result

ID: Atractylodes22_contig00014358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014358
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516244.1| polygalacturonase, putative [Ricinus communi...   128   4e-28
ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like i...   119   3e-25
ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like i...   119   3e-25
ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis...   118   4e-25

>ref|XP_002516244.1| polygalacturonase, putative [Ricinus communis]
           gi|223544730|gb|EEF46246.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 494

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/102 (61%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
 Frame = -2

Query: 305 RFNYRRWIPGLFSSYKTLFALLWIVVFTSLFIWQRNFV-DGLSIFXXXXXXXXXXXXXXV 129
           R   +RW+P  FSS+KTLF +LWI  F S+F+WQRN V DG ++F              V
Sbjct: 15  RLELKRWVPTFFSSHKTLFTVLWIAAFASVFVWQRNVVGDGFAVFFKASPMRPMPKLRPV 74

Query: 128 AFNLTDFGAVGDGVTVNTAAFEKAVFAISKLGKKGGGQLNVP 3
           AFNLTDFG VGDGVT+NT AFE+AV AISKLGKKGGGQLNVP
Sbjct: 75  AFNLTDFGGVGDGVTLNTEAFERAVLAISKLGKKGGGQLNVP 116


>ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  121 bits (303), Expect = 7e-26
 Identities = 69/119 (57%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
 Frame = -2

Query: 341 MVETLTSSPPIWRFNYRRW-----IPGLFSSYKTLFALLWIVVFTSLFIWQRNFVD-GLS 180
           MVET+ + PP  RFNY+R      +P   SS+KTLFALLWI  F S+F+W+RN V  GL+
Sbjct: 1   MVETI-APPPSSRFNYKRLELKRCLPAFLSSHKTLFALLWIAAFASVFLWKRNPVGAGLA 59

Query: 179 IFXXXXXXXXXXXXXXVAFNLTDFGAVGDGVTVNTAAFEKAVFAISKLGKKGGGQLNVP 3
           +F               AFNLTDFGAVGDG TVNT AFE+AV AISKL K+GGGQLNVP
Sbjct: 60  VFWRGPLRPMPQLRPV-AFNLTDFGAVGDGATVNTEAFERAVSAISKLSKRGGGQLNVP 117


>ref|XP_003551103.1| PREDICTED: probable polygalacturonase-like isoform 2 [Glycine max]
          Length = 491

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/101 (56%), Positives = 68/101 (67%)
 Frame = -2

Query: 305 RFNYRRWIPGLFSSYKTLFALLWIVVFTSLFIWQRNFVDGLSIFXXXXXXXXXXXXXXVA 126
           R + RRW+P  F+S+KTL  LLWI  F S+F+WQRN V G  ++               A
Sbjct: 15  RLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGGIPGRPMPMLRPM-A 73

Query: 125 FNLTDFGAVGDGVTVNTAAFEKAVFAISKLGKKGGGQLNVP 3
           FNLTDFG VGDGVT+NT AFE+AV A+SK GKKGG QLNVP
Sbjct: 74  FNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVP 114


>ref|XP_003551102.1| PREDICTED: probable polygalacturonase-like isoform 1 [Glycine max]
          Length = 492

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/101 (56%), Positives = 68/101 (67%)
 Frame = -2

Query: 305 RFNYRRWIPGLFSSYKTLFALLWIVVFTSLFIWQRNFVDGLSIFXXXXXXXXXXXXXXVA 126
           R + RRW+P  F+S+KTL  LLWI  F S+F+WQRN V G  ++               A
Sbjct: 15  RLDLRRWVPAFFTSHKTLLTLLWIAAFASVFLWQRNIVGGFLVYGGIPGRPMPMLRPM-A 73

Query: 125 FNLTDFGAVGDGVTVNTAAFEKAVFAISKLGKKGGGQLNVP 3
           FNLTDFG VGDGVT+NT AFE+AV A+SK GKKGG QLNVP
Sbjct: 74  FNLTDFGGVGDGVTLNTEAFERAVSAVSKFGKKGGAQLNVP 114


>ref|XP_002277239.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
           gi|297738532|emb|CBI27777.3| unnamed protein product
           [Vitis vinifera]
          Length = 493

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/101 (57%), Positives = 69/101 (68%)
 Frame = -2

Query: 305 RFNYRRWIPGLFSSYKTLFALLWIVVFTSLFIWQRNFVDGLSIFXXXXXXXXXXXXXXVA 126
           R + +RWIP   SS++TLF +LWI  F S+F+WQRN V+GL  F                
Sbjct: 16  RPDLKRWIPAFLSSHRTLFTILWIAAFASVFVWQRNIVEGLLTFRRAPARPLPRLRPA-V 74

Query: 125 FNLTDFGAVGDGVTVNTAAFEKAVFAISKLGKKGGGQLNVP 3
           +NLTDFG VGD VTVNT AFE+A+ AISKLGKKGGGQLNVP
Sbjct: 75  YNLTDFGGVGDSVTVNTEAFERAISAISKLGKKGGGQLNVP 115


Top