BLASTX nr result

ID: Atractylodes22_contig00014352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014352
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   109   6e-22
ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21
dbj|BAJ07983.1| RING finger family protein [Silene latifolia]         104   2e-20
ref|XP_002516614.1| ring finger protein, putative [Ricinus commu...   103   5e-20
ref|XP_002517522.1| ring finger protein, putative [Ricinus commu...   100   3e-19

>ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
           vinifera]
          Length = 427

 Score =  109 bits (273), Expect = 6e-22
 Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
 Frame = +1

Query: 331 MAVIPEEQNIDHAMDSFPLLVESRGNHEN-QHVIDL-------------ERGXXXXXXXX 468
           MAV  +E + +   D +PLL+E   N+EN +H++D+             E          
Sbjct: 1   MAVSSQEPSCESQTDRYPLLMERPENYENHEHIVDIVSASDASSSSSSDEDSAHVSNPTH 60

Query: 469 XXXXXXXXXXXXXXVSTSQLVRASSSGSNALXXXXXXXXXXXWSPFDTLLWILIELVFTL 648
                          S+      S S ++++           WSPF++ LWI IE+VFT 
Sbjct: 61  HENRPLTDAWVPISQSSPSSSDVSESRNSSIITRAHGPGRRRWSPFNSGLWISIEIVFTT 120

Query: 649 GQIIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYL 783
             I+ASIVVL +SR E P TPLFAW+VGYAAGC ASLP L+WRYL
Sbjct: 121 SLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWRYL 165


>ref|XP_002309588.1| predicted protein [Populus trichocarpa] gi|222855564|gb|EEE93111.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score =  106 bits (265), Expect = 5e-21
 Identities = 65/161 (40%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
 Frame = +1

Query: 331 MAVIPEEQNIDHAMDSFPLLVESRGN-HENQHVIDLERGXXXXXXXXXXXXXXXXXXXXX 507
           M V   E + +   D+FPLL+E   N + + H+ID+ R                      
Sbjct: 1   MDVPSTELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGSPSHDRISSGLEASSH 60

Query: 508 XVSTSQLVRASSS----------GSNALXXXXXXXXXXXWSPFDTLLWILIELVFTLGQI 657
               S  VRA S+           S +             SP ++ LWI +ELV TL QI
Sbjct: 61  EDRPSSGVRAPSTQPSTSLSNGTNSRSSSLIRRGEARRRRSPLNSGLWISVELVLTLSQI 120

Query: 658 IASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRY 780
           +ASIVVL +SRHE+PH PLFAWIVGYA+GCVA+LP LYWRY
Sbjct: 121 VASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRY 161


>dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
          Length = 434

 Score =  104 bits (260), Expect = 2e-20
 Identities = 63/160 (39%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
 Frame = +1

Query: 331 MAVIPEEQNIDHAMDSFPLLVESRGNHEN-QHVIDLERGXXXXXXXXXXXXXXXXXXXXX 507
           MA+  ++   +   D +PLL+E   NH N +HVI+++RG                     
Sbjct: 1   MAISSDKPMHETHTDQYPLLMERHDNHINVEHVINIDRGGEASSSESSGLEFPHGGIHIH 60

Query: 508 X---VSTSQLVRASSSGS-----NALXXXXXXXXXXXWSPFDTLLWILIELVFTLGQIIA 663
                + SQ     SS S     N              SPF++  WI IEL FTL QIIA
Sbjct: 61  SHRETNGSQTPPNGSSASSPSQGNTRSPRSESMGRRNLSPFNSGFWISIELAFTLTQIIA 120

Query: 664 SIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRYL 783
           S +VL +SRHE+P  PLFAW+VGY AGCVASLP +YWR++
Sbjct: 121 STIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRFI 160


>ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
           gi|223544434|gb|EEF45955.1| ring finger protein,
           putative [Ricinus communis]
          Length = 437

 Score =  103 bits (256), Expect = 5e-20
 Identities = 65/162 (40%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
 Frame = +1

Query: 331 MAVIPEEQNIDHAMDSFPLLVE-SRGNHENQHVIDLERGXXXXXXXXXXXXXXXXXXXXX 507
           M V   EQ+ +   D+ PLL+E S   + ++H+ID+ R                      
Sbjct: 1   MDVSSTEQHSESLTDTCPLLMEQSNSINSSEHIIDIPRSSDSSPSTSHDRTTSGLEASSN 60

Query: 508 X---------VSTSQLVRASSSGSNALXXXXXXXXXXXW--SPFDTLLWILIELVFTLGQ 654
                      S S L   +S+GSN                SP ++ LWI +ELV T+ Q
Sbjct: 61  EDRPTTSVRTPSISHLSTGTSNGSNTRNSSLIRRGEARRRRSPLNSGLWISVELVLTVSQ 120

Query: 655 IIASIVVLYISRHENPHTPLFAWIVGYAAGCVASLPFLYWRY 780
           IIASIVVL +SRHE+P  PLFAWIVGYA+GCVA+LP LYWRY
Sbjct: 121 IIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWRY 162


>ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
           gi|223543154|gb|EEF44686.1| ring finger protein,
           putative [Ricinus communis]
          Length = 421

 Score =  100 bits (250), Expect = 3e-19
 Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 8/145 (5%)
 Frame = +1

Query: 370 MDSFPLLVESRGNHEN-QHVIDLERGXXXXXXXXXXXXXXXXXXXXXXVSTSQLVRASSS 546
           +D +PLL+E   +H++ +H+I +                           +S   ++SSS
Sbjct: 16  IDQYPLLMERMDSHDDHEHIISITGNEDGSSNSSHNGQPPDIDLPYHEDRSSSAHQSSSS 75

Query: 547 GSNALXXXXXXXXXXX-------WSPFDTLLWILIELVFTLGQIIASIVVLYISRHENPH 705
             N L                   SPF++ LWI IEL  T+GQIIASIVVL +SR+ENP 
Sbjct: 76  SLNRLNSRNSTFARRGDGYDRRRRSPFNSGLWISIELFVTVGQIIASIVVLSLSRNENPQ 135

Query: 706 TPLFAWIVGYAAGCVASLPFLYWRY 780
            PLFAW+VGYA+GCVA+LP LYWR+
Sbjct: 136 APLFAWVVGYASGCVATLPILYWRF 160


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