BLASTX nr result

ID: Atractylodes22_contig00014316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014316
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319467.1| global transcription factor group [Populus t...    57   3e-06
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...    57   4e-06
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...    57   4e-06
gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...    57   4e-06
ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group] g...    57   4e-06

>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
           gi|222857843|gb|EEE95390.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1053

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +2

Query: 437 PQLTANLTKSGGAGICVELCESGLSLNEKNERILKAGMVLNL 562
           P+LTANLTK+ G GI +E  ESGLSLN KN+++L+ GMV N+
Sbjct: 366 PELTANLTKTAGTGIGLEFRESGLSLNSKNDQVLRQGMVFNV 407


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
           [Cucumis sativus]
          Length = 1073

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 437 PQLTANLTKSGGAGICVELCESGLSLNEKNERILKAGMVLNL 562
           P+L  NLTKS G GI +E  ESGL+LN KN+RI+KAGMV N+
Sbjct: 366 PELVPNLTKSAGTGIGLEFRESGLNLNAKNDRIVKAGMVFNV 407


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 437 PQLTANLTKSGGAGICVELCESGLSLNEKNERILKAGMVLNL 562
           P+L  NLTKS G GI +E  ESGL+LN KN+RI+KAGMV N+
Sbjct: 366 PELVPNLTKSAGTGIGLEFRESGLNLNAKNDRIVKAGMVFNV 407


>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 437 PQLTANLTKSGGAGICVELCESGLSLNEKNERILKAGMVLNL 562
           P+L  NLTKS G GI +E  ESGL+LN KN+RI+KAGMV N+
Sbjct: 357 PELLRNLTKSAGTGIGLEFRESGLNLNPKNDRIIKAGMVFNV 398


>ref|NP_001052463.1| Os04g0321600 [Oryza sativa Japonica Group]
           gi|75295962|sp|Q7X923.2|SPT16_ORYSJ RecName: Full=FACT
           complex subunit SPT16; AltName: Full=Facilitates
           chromatin transcription complex subunit SPT16
           gi|38346977|emb|CAD40293.2| OSJNBb0062H02.2 [Oryza
           sativa Japonica Group] gi|113564034|dbj|BAF14377.1|
           Os04g0321600 [Oryza sativa Japonica Group]
           gi|215768327|dbj|BAH00556.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 1056

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +2

Query: 437 PQLTANLTKSGGAGICVELCESGLSLNEKNERILKAGMVLNL 562
           P+L  NLTKS G GI +E  ESGL+LN KN+RI+KAGMV N+
Sbjct: 357 PELLRNLTKSAGTGIGLEFRESGLNLNPKNDRIIKAGMVFNV 398


Top