BLASTX nr result

ID: Atractylodes22_contig00014299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014299
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45716.1| RGC2-like protein [Cichorium endivia]                   64   1e-08
gb|AAQ73141.1| resistance protein RGC2 [Lactuca saligna]               64   2e-08
gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]     63   3e-08
gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]                63   3e-08
gb|AAQ73151.1| resistance protein RGC2 [Lactuca sativa]                62   4e-08

>gb|AAP45716.1| RGC2-like protein [Cichorium endivia]
          Length = 407

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
 Frame = -1

Query: 251 SHPTTSEGIIHWSFNNLXXXXXXXXXXXXXXIPSKELLQVQKLERIHVHGCGDVKEVFEA 72
           S P TSEG+ HWSF+NL              IPS ELLQ+QKLE+I+V+ C  VKEVFEA
Sbjct: 203 SFPATSEGL-HWSFHNLIELYVKFNHAVKKIIPSNELLQLQKLEKIYVYECSLVKEVFEA 261

Query: 71  ----AGKDSGL---SELPFVVKIPKLREVE 3
                   SG    S+   + K+P L +VE
Sbjct: 262 LEGGTNSSSGFDESSQTTTLFKLPNLTQVE 291


>gb|AAQ73141.1| resistance protein RGC2 [Lactuca saligna]
          Length = 414

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/81 (50%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = -1

Query: 242 TTSEGIIHWSFNNLXXXXXXXXXXXXXXIPSKELLQVQKLERIHVHGCGDVKEVFEA-AG 66
           TTSEGI  WSF+NL              IPS ELLQ+QKLE+IHV     V+ VF+A  G
Sbjct: 221 TTSEGI-PWSFHNLIESQVKFNAYIETIIPSSELLQLQKLEKIHVRDNTWVELVFDALKG 279

Query: 65  KDSGLSELPFVVKIPKLREVE 3
            DS   E   V+K+P LREVE
Sbjct: 280 TDSAFDESETVIKLPNLREVE 300


>gb|AAD03673.1| resistance protein candidate RGC20 [Lactuca sativa]
          Length = 1758

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/92 (43%), Positives = 49/92 (53%)
 Frame = -1

Query: 278  PCSSLDGRGSHPTTSEGIIHWSFNNLXXXXXXXXXXXXXXIPSKELLQVQKLERIHVHGC 99
            P  SL G  S P T+EG+  WSF+NL              IPS E+LQ+QKLE+IHV  C
Sbjct: 1506 PFPSLHGAISCPVTTEGM-RWSFHNLIELDVGCNRDVKKIIPSSEMLQLQKLEKIHVRYC 1564

Query: 98   GDVKEVFEAAGKDSGLSELPFVVKIPKLREVE 3
              ++EVFE A     L     V  +P LR VE
Sbjct: 1565 HGLEEVFETA-----LESATTVFNLPNLRHVE 1591


>gb|AAQ72577.1| resistance protein RGC2 [Lactuca sativa]
          Length = 747

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/72 (51%), Positives = 44/72 (61%)
 Frame = -1

Query: 269 SLDGRGSHPTTSEGIIHWSFNNLXXXXXXXXXXXXXXIPSKELLQVQKLERIHVHGCGDV 90
           SL G  S P TSEGI  WSF+NL              IPS ELLQ+QKLE+IHV GC  V
Sbjct: 464 SLYGDTSGPATSEGIT-WSFHNLIELDVKFNKDVKKIIPSSELLQLQKLEKIHVRGCEMV 522

Query: 89  KEVFEAAGKDSG 54
           +E+FE A + +G
Sbjct: 523 EEIFETALEAAG 534


>gb|AAQ73151.1| resistance protein RGC2 [Lactuca sativa]
          Length = 502

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
 Frame = -1

Query: 278 PCSSLDGRGSHPTTSEGIIHWSFNNLXXXXXXXXXXXXXXIPSKELLQVQKLERIHVHGC 99
           P  S  G  S+P TS+G+  WSF+NL              IPS ELLQ+Q+LE+IH+  C
Sbjct: 213 PSPSSHGATSYPATSDGM-PWSFHNLIKLDVKYNMDVKKIIPSSELLQLQRLEKIHIDSC 271

Query: 98  GDVKEVFEAA----------GKDSGLSE------LPFVVKIPKLREVE 3
             V+EVFE A          G  SG  E         VV +P LRE++
Sbjct: 272 SKVEEVFETALEAAGRNGNSGCGSGFDEPSQTTTTTTVVNLPNLREMK 319


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