BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014283
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   400   e-109
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     400   e-109
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   399   e-109
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   398   e-109
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    395   e-108

>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  400 bits (1029), Expect = e-109
 Identities = 190/270 (70%), Positives = 224/270 (82%)
 Frame = +2

Query: 2    DIIDFFMENMVNDSLGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKIVNM 181
            DIIDFF +NMV +SLG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK+V M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 182  PPQLKPKLYPDFMGKEDFQSYKSKKILGKLYRQIKDCNNTDVTQPSELHILPFQVPYDKD 361
            P  LKPK+YPDFMGKE+FQSYKSKKILGKLYRQ+KD  +T+    + L ++P  +PYD  
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSS 1026

Query: 362  LEIPKAARFVNDAWRCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKYSSKKQGELKE 541
            LEIP +  F+ DAW CK SYD QL+GLLGQYKV REEE+VTGHIWSMPKYS+KKQGELKE
Sbjct: 1027 LEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 542  KIKHAYSALRREFRKVFDHLGPDFDQISEEERNARYERKASAWYQVTYHPIWVKKSLKLQ 721
            ++KHAY+ LR+EFR VF+ + PDFD + ++E+N  YERKASAWYQVTY+P WV +SL+LQ
Sbjct: 1087 RLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQ 1146

Query: 722  EPDGESETVNLSFAWIAADYLARIKIKCRG 811
             PD  S TV LSFAWIAADYLARI I+ RG
Sbjct: 1147 LPDAVSSTVMLSFAWIAADYLARINIRHRG 1176


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  400 bits (1029), Expect = e-109
 Identities = 190/270 (70%), Positives = 225/270 (83%)
 Frame = +2

Query: 2    DIIDFFMENMVNDSLGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKIVNM 181
            DIIDFF +NMV +SLG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK+V M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 182  PPQLKPKLYPDFMGKEDFQSYKSKKILGKLYRQIKDCNNTDVTQPSELHILPFQVPYDKD 361
            P  LKPK+YPDFMGKE+FQSYKSKKILGKLYRQ+KD  +T+    + L ++P  +PYD  
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSS 1026

Query: 362  LEIPKAARFVNDAWRCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKYSSKKQGELKE 541
            LEIP +  F++DAW  K SYD QL+GLLGQYKV REEE+VTGHIWSMPKYS+KKQGELKE
Sbjct: 1027 LEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 542  KIKHAYSALRREFRKVFDHLGPDFDQISEEERNARYERKASAWYQVTYHPIWVKKSLKLQ 721
            ++KHAY+ LR+EFR VF+ + PDFD + ++E+N  YERKASAWYQVTY+P WV +SL+LQ
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQ 1146

Query: 722  EPDGESETVNLSFAWIAADYLARIKIKCRG 811
             PD  S TV LSFAWIAADYLARIKI+ RG
Sbjct: 1147 LPDAVSSTVMLSFAWIAADYLARIKIRHRG 1176


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  399 bits (1025), Expect = e-109
 Identities = 190/270 (70%), Positives = 223/270 (82%)
 Frame = +2

Query: 2    DIIDFFMENMVNDSLGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKIVNM 181
            DIIDFF +NMV +SLG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK+V M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 182  PPQLKPKLYPDFMGKEDFQSYKSKKILGKLYRQIKDCNNTDVTQPSELHILPFQVPYDKD 361
            P  LKPK+YPDFMGKE+FQSYKSKKILGKLYRQ+KD  + +    + L ++P  +PYD  
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTT 1026

Query: 362  LEIPKAARFVNDAWRCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKYSSKKQGELKE 541
            LEI  +  F++DAW  K SYD QLNGLLGQYKV REEE+VTGHIWSMPKYS+KKQGELKE
Sbjct: 1027 LEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 542  KIKHAYSALRREFRKVFDHLGPDFDQISEEERNARYERKASAWYQVTYHPIWVKKSLKLQ 721
            ++KHAY+ LR+EFR VF+ + PDFD + ++E+N  YERKASAWYQVTYHP WV +SL+LQ
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQ 1146

Query: 722  EPDGESETVNLSFAWIAADYLARIKIKCRG 811
             PD  S TV LSFAWIAADYLARIKI+ RG
Sbjct: 1147 IPDAVSSTVMLSFAWIAADYLARIKIRHRG 1176


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1200

 Score =  398 bits (1022), Expect = e-109
 Identities = 183/269 (68%), Positives = 229/269 (85%)
 Frame = +2

Query: 2    DIIDFFMENMVNDSLGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKIVNM 181
            DII+FF +NMVND+LG ICNAHVVHAD S YGA D+ C+ LAELAATAVDFPKTGK+V+M
Sbjct: 910  DIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSM 969

Query: 182  PPQLKPKLYPDFMGKEDFQSYKSKKILGKLYRQIKDCNNTDVTQPSELHILPFQVPYDKD 361
            PP LKPK+YPDFMGKE++QSYKS+KILG+LYRQIKD  + DV   SEL+++P  +PYD D
Sbjct: 970  PPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSD 1029

Query: 362  LEIPKAARFVNDAWRCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKYSSKKQGELKE 541
            LE+  A+ +++DAW  K SYD QLNGLL QYKV REEE+VTGHIWSMPKYSS+KQGELK+
Sbjct: 1030 LEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKD 1089

Query: 542  KIKHAYSALRREFRKVFDHLGPDFDQISEEERNARYERKASAWYQVTYHPIWVKKSLKLQ 721
            ++KH+Y++L++EFR++F+ +  +F+Q+ + E+N  YE+KASAWYQV YHP WVKKSL+LQ
Sbjct: 1090 RLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQ 1149

Query: 722  EPDGESETVNLSFAWIAADYLARIKIKCR 808
            +PDG   +V LSFAWIAADYLARIKI+ R
Sbjct: 1150 DPDGAGTSVMLSFAWIAADYLARIKIRHR 1178


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  395 bits (1016), Expect = e-108
 Identities = 188/269 (69%), Positives = 222/269 (82%)
 Frame = +2

Query: 2    DIIDFFMENMVNDSLGTICNAHVVHADTSNYGAMDEKCIKLAELAATAVDFPKTGKIVNM 181
            DIIDFF +NMV +SLG ICNAHVVHAD S +GA+DEKC+KLAELAA AVDFPKTGK+V M
Sbjct: 907  DIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTM 966

Query: 182  PPQLKPKLYPDFMGKEDFQSYKSKKILGKLYRQIKDCNNTDVTQPSELHILPFQVPYDKD 361
            P  LKPK+YPDFMGKE+FQSYKSKKILGKLYRQ+KD  + +    + L ++P  +PYD  
Sbjct: 967  PFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDST 1026

Query: 362  LEIPKAARFVNDAWRCKLSYDRQLNGLLGQYKVAREEEIVTGHIWSMPKYSSKKQGELKE 541
            LEI  +  F++DAW  K SYD QL+GLLGQYKV REEE+VTGHIWSMPKYS+KKQGELKE
Sbjct: 1027 LEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKE 1086

Query: 542  KIKHAYSALRREFRKVFDHLGPDFDQISEEERNARYERKASAWYQVTYHPIWVKKSLKLQ 721
            ++KHAY+ LR+EFR VF+ + PDFD + ++E+N  YERKASAWYQVTYHP WV +SL+LQ
Sbjct: 1087 RLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQ 1146

Query: 722  EPDGESETVNLSFAWIAADYLARIKIKCR 808
             PD  S TV LSFAWIAADYLARIKI+ R
Sbjct: 1147 LPDAVSNTVMLSFAWIAADYLARIKIRHR 1175