BLASTX nr result

ID: Atractylodes22_contig00014259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014259
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   199   2e-49
ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein lig...   197   8e-49
ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein lig...   197   8e-49
ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein lig...   197   8e-49
ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein lig...   197   8e-49

>ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 474

 Score =  199 bits (507), Expect = 2e-49
 Identities = 94/141 (66%), Positives = 106/141 (75%)
 Frame = -1

Query: 581 YTWGLGNMGQLGHYSLQSGDKELIPRRVVALNGIFVKDVASGGLHTCAVTTKXXXXXXXX 402
           YTWGLGNMGQLGH SLQ GDKEL+PRRVV L+GIF+KDVA GG+HTCA+T          
Sbjct: 248 YTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGVHTCALTQGGALYTWGG 307

Query: 401 XXXXXXXXXXXXGFFSCVASESGNMFRNMPVLVLPFGVKHVACGHSHTLISTQDGRIHGW 222
                       G FSCVA++S   FRN+PVLV+P GV+ VACGHSHTLIS  DGRIHGW
Sbjct: 308 GQSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVVPKGVQLVACGHSHTLISMSDGRIHGW 367

Query: 221 GYNSYGQATNQKCTYAWYPSP 159
           GYN+YGQA N+KCTYAWYPSP
Sbjct: 368 GYNNYGQAANEKCTYAWYPSP 388


>ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Cucumis sativus]
          Length = 472

 Score =  197 bits (502), Expect = 8e-49
 Identities = 92/141 (65%), Positives = 106/141 (75%)
 Frame = -1

Query: 581 YTWGLGNMGQLGHYSLQSGDKELIPRRVVALNGIFVKDVASGGLHTCAVTTKXXXXXXXX 402
           YTWGLG+MGQLGH SLQS DKELIPRRVVAL+GI VKD+A GG+HTCA+T          
Sbjct: 248 YTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGG 307

Query: 401 XXXXXXXXXXXXGFFSCVASESGNMFRNMPVLVLPFGVKHVACGHSHTLISTQDGRIHGW 222
                       GFFSC+A +S    RN+PV+V+  GV+HVACGHSHTL+ST+DGRIHGW
Sbjct: 308 GQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGW 367

Query: 221 GYNSYGQATNQKCTYAWYPSP 159
           GYNSYGQA N+K TYAWYPSP
Sbjct: 368 GYNSYGQAANEKSTYAWYPSP 388


>ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Cucumis sativus]
          Length = 485

 Score =  197 bits (502), Expect = 8e-49
 Identities = 92/141 (65%), Positives = 106/141 (75%)
 Frame = -1

Query: 581 YTWGLGNMGQLGHYSLQSGDKELIPRRVVALNGIFVKDVASGGLHTCAVTTKXXXXXXXX 402
           YTWGLG+MGQLGH SLQS DKELIPRRVVAL+GI VKD+A GG+HTCA+T          
Sbjct: 248 YTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGG 307

Query: 401 XXXXXXXXXXXXGFFSCVASESGNMFRNMPVLVLPFGVKHVACGHSHTLISTQDGRIHGW 222
                       GFFSC+A +S    RN+PV+V+  GV+HVACGHSHTL+ST+DGRIHGW
Sbjct: 308 GQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGW 367

Query: 221 GYNSYGQATNQKCTYAWYPSP 159
           GYNSYGQA N+K TYAWYPSP
Sbjct: 368 GYNSYGQAANEKSTYAWYPSP 388


>ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Cucumis sativus]
          Length = 472

 Score =  197 bits (502), Expect = 8e-49
 Identities = 92/141 (65%), Positives = 106/141 (75%)
 Frame = -1

Query: 581 YTWGLGNMGQLGHYSLQSGDKELIPRRVVALNGIFVKDVASGGLHTCAVTTKXXXXXXXX 402
           YTWGLG+MGQLGH SLQS DKELIPRRVVAL+GI VKD+A GG+HTCA+T          
Sbjct: 248 YTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGG 307

Query: 401 XXXXXXXXXXXXGFFSCVASESGNMFRNMPVLVLPFGVKHVACGHSHTLISTQDGRIHGW 222
                       GFFSC+A +S    RN+PV+V+  GV+HVACGHSHTL+ST+DGRIHGW
Sbjct: 308 GQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGW 367

Query: 221 GYNSYGQATNQKCTYAWYPSP 159
           GYNSYGQA N+K TYAWYPSP
Sbjct: 368 GYNSYGQAANEKSTYAWYPSP 388


>ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Cucumis sativus]
          Length = 485

 Score =  197 bits (502), Expect = 8e-49
 Identities = 92/141 (65%), Positives = 106/141 (75%)
 Frame = -1

Query: 581 YTWGLGNMGQLGHYSLQSGDKELIPRRVVALNGIFVKDVASGGLHTCAVTTKXXXXXXXX 402
           YTWGLG+MGQLGH SLQS DKELIPRRVVAL+GI VKD+A GG+HTCA+T          
Sbjct: 248 YTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQNGSLYAWGG 307

Query: 401 XXXXXXXXXXXXGFFSCVASESGNMFRNMPVLVLPFGVKHVACGHSHTLISTQDGRIHGW 222
                       GFFSC+A +S    RN+PV+V+  GV+HVACGHSHTL+ST+DGRIHGW
Sbjct: 308 GQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQHVACGHSHTLVSTKDGRIHGW 367

Query: 221 GYNSYGQATNQKCTYAWYPSP 159
           GYNSYGQA N+K TYAWYPSP
Sbjct: 368 GYNSYGQAANEKSTYAWYPSP 388


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