BLASTX nr result

ID: Atractylodes22_contig00014232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014232
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...    71   1e-10
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...    70   2e-10
gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]    68   7e-10
ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana] gi|...    68   7e-10
ref|XP_002874845.1| hypothetical protein ARALYDRAFT_352456 [Arab...    67   1e-09

>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
           lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
           ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSDVNKF--IAMFKHVVDR 44
           R+GV +ILENAQKVC +WR++CK+P+MWR I I     R    D+ K+   +M +H VDR
Sbjct: 23  RLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNSGNR----DIFKYDLDSMCRHAVDR 78

Query: 43  SQGQLIDITIVDF 5
           SQG L++I I  F
Sbjct: 79  SQGGLLEIDIEYF 91



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSDVNKFI-AMFKHVVDRS 41
           R+G  DILENAQKVC +WR++CK+P+MWR I    MD    L  +   +  M +H VDRS
Sbjct: 361 RLGTIDILENAQKVCRSWRRVCKDPSMWRKI---DMDNLGDLGAMGYDLEIMCRHAVDRS 417

Query: 40  QGQLIDITI 14
           QG L++I I
Sbjct: 418 QGGLVEIDI 426


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
           lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
           ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/71 (49%), Positives = 47/71 (66%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSDVNKFIAMFKHVVDRSQ 38
           R+G  DILENAQKVCT+WR++  +P MWR I + Y+      S +  F +M +H VDRSQ
Sbjct: 32  RLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMHYLGDMG--SMIYDFESMCRHAVDRSQ 89

Query: 37  GQLIDITIVDF 5
           G L++I I  F
Sbjct: 90  GGLVEIDIWHF 100


>gb|AAM65310.1| F-box protein family, AtFBL20 [Arabidopsis thaliana]
          Length = 302

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/68 (51%), Positives = 47/68 (69%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSDVNKFIAMFKHVVDRSQ 38
           R+G  +ILENAQKVC +WR++CK+P+MWR I +  +     + D N  I M +H VDRSQ
Sbjct: 33  RLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM-DYNLEI-MCRHAVDRSQ 90

Query: 37  GQLIDITI 14
           G L+DI I
Sbjct: 91  GGLVDIGI 98


>ref|NP_567294.1| F-box protein SKIP19 [Arabidopsis thaliana]
           gi|75335768|sp|Q9M0U9.1|SKI19_ARATH RecName: Full=F-box
           protein SKIP19; AltName: Full=F-box/LRR-repeat protein
           20; AltName: Full=SKP1-interacting partner 19
           gi|7267306|emb|CAB81088.1| N7 like-protein [Arabidopsis
           thaliana] gi|27765050|gb|AAO23646.1| At4g05460
           [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| N7
           like-protein [Arabidopsis thaliana]
           gi|332657123|gb|AEE82523.1| F-box protein SKIP19
           [Arabidopsis thaliana]
          Length = 302

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/68 (51%), Positives = 47/68 (69%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSDVNKFIAMFKHVVDRSQ 38
           R+G  +ILENAQKVC +WR++CK+P+MWR I +  +     + D N  I M +H VDRSQ
Sbjct: 33  RLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDM-DYNLEI-MCRHAVDRSQ 90

Query: 37  GQLIDITI 14
           G L+DI I
Sbjct: 91  GGLVDIGI 98


>ref|XP_002874845.1| hypothetical protein ARALYDRAFT_352456 [Arabidopsis lyrata subsp.
           lyrata] gi|297320682|gb|EFH51104.1| hypothetical protein
           ARALYDRAFT_352456 [Arabidopsis lyrata subsp. lyrata]
          Length = 138

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/74 (48%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
 Frame = -1

Query: 217 RVGVFDILENAQKVCTTWRKICKEPAMWRVIFIAYMDARPPLSD---VNKFIAMFKHVVD 47
           R+ V DIL NAQKVC  WR+ICKEP+MWR I     D R  + D   ++    M +H VD
Sbjct: 41  RLSVADILNNAQKVCRPWRRICKEPSMWRKI-----DMRSLIRDRGMLDPLAIMCRHAVD 95

Query: 46  RSQGQLIDITIVDF 5
           RSQG L+ I + +F
Sbjct: 96  RSQGGLVKIHLGNF 109


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