BLASTX nr result

ID: Atractylodes22_contig00014186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014186
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   260   2e-67
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   258   1e-66
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              258   1e-66
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   258   1e-66
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   254   2e-65

>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  260 bits (665), Expect = 2e-67
 Identities = 126/220 (57%), Positives = 160/220 (72%), Gaps = 6/220 (2%)
 Frame = +2

Query: 2   SMSKDSKVRVWDASISSSGRNSSCVGMTSVPGVPVAMKCHDSLLYMAAGSFIEAVDLRTM 181
           ++SKDSKVRVWD + SS+ R+S CVGMTSVPG PV +KC +SLLY+AAGS + A+DLRTM
Sbjct: 271 TISKDSKVRVWDTTTSSAVRSSCCVGMTSVPGAPVDVKCCESLLYVAAGSSVVAIDLRTM 330

Query: 182 RRVFRTSTNQGKLYSFDIMPSRFLACTGGLGRAMLWDIRRSTATGEADPMAELDGHIGPV 361
           ++V   +  Q KL SF I+PS+ L CTGG+ +A LWDIR +  T + +P+AELDGH GPV
Sbjct: 331 QKVITVAIYQPKLCSFAIVPSKPLICTGGIDKAKLWDIRINQETLKPEPVAELDGHTGPV 390

Query: 362 THLHMDPYKIVTGGPEDPYVNIWQADTGNQTNSLICSPLDSG------GCCGLAADGFCI 523
           T LHMDPYKIVTGGPED Y+N+W+ DTG QTNS IC P D+       GC  +A +G  I
Sbjct: 391 TLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFICCPSDAASSSSGMGCSAMAVNGTRI 450

Query: 524 VTAGYNQDEGVLRFRDFNNAVCSGSSSEQITGSKFWGPST 643
           VTA Y ++ G++ FRDF NA C+ S  E +  SKFW P +
Sbjct: 451 VTASYGEEHGLVCFRDFFNATCAVSKREDVLASKFWDPQS 490


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  258 bits (659), Expect = 1e-66
 Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   SMSKDSKVRVWDASISSSGRNSSCVGMTSVPGVPVAMKCHDSLLYMAAGSFIEAVDLRTM 181
           ++SKDSKVRVWD + SS+ R+S CVGMTSV G PV MKC++SLL++AAGS +  +DLRTM
Sbjct: 267 TISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTM 326

Query: 182 RRVFRTSTNQGKLYSFDIMPSRFLACTGGLGRAMLWDIRRSTATGEADPMAELDGHIGPV 361
           +RV   +  Q ++YSFDI+PS+ L CTGG G+AMLWDIR+S  T + +P+ E+DGH GPV
Sbjct: 327 QRVITAAIGQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPV 386

Query: 362 THLHMDPYKIVTGGPEDPYVNIWQADTGNQTNSLICS----PLDSGGCCGLAADGFCIVT 529
           T LHMDPYKIVTGGPED +VN+W+ DTG QTN+L CS    P  + GC  +AADG  IVT
Sbjct: 387 TLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVT 446

Query: 530 AGYNQDEGVLRFRDFNNAVCSGSSS-EQITGSKFWGP 637
           A    ++G++ FRDF +A C  SSS E    SKFW P
Sbjct: 447 ASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDP 483


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  258 bits (659), Expect = 1e-66
 Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   SMSKDSKVRVWDASISSSGRNSSCVGMTSVPGVPVAMKCHDSLLYMAAGSFIEAVDLRTM 181
           ++SKDSKVRVWD + SS+ R+S CVGMTSV G PV MKC++SLL++AAGS +  +DLRTM
Sbjct: 264 TISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTM 323

Query: 182 RRVFRTSTNQGKLYSFDIMPSRFLACTGGLGRAMLWDIRRSTATGEADPMAELDGHIGPV 361
           +RV   +  Q ++YSFDI+PS+ L CTGG G+AMLWDIR+S  T + +P+ E+DGH GPV
Sbjct: 324 QRVITAAIGQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPV 383

Query: 362 THLHMDPYKIVTGGPEDPYVNIWQADTGNQTNSLICS----PLDSGGCCGLAADGFCIVT 529
           T LHMDPYKIVTGGPED +VN+W+ DTG QTN+L CS    P  + GC  +AADG  IVT
Sbjct: 384 TLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVT 443

Query: 530 AGYNQDEGVLRFRDFNNAVCSGSSS-EQITGSKFWGP 637
           A    ++G++ FRDF +A C  SSS E    SKFW P
Sbjct: 444 ASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDP 480


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  258 bits (659), Expect = 1e-66
 Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   SMSKDSKVRVWDASISSSGRNSSCVGMTSVPGVPVAMKCHDSLLYMAAGSFIEAVDLRTM 181
           ++SKDSKVRVWD + SS+ R+S CVGMTSV G PV MKC++SLL++AAGS +  +DLRTM
Sbjct: 264 TISKDSKVRVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTM 323

Query: 182 RRVFRTSTNQGKLYSFDIMPSRFLACTGGLGRAMLWDIRRSTATGEADPMAELDGHIGPV 361
           +RV   +  Q ++YSFDI+PS+ L CTGG G+AMLWDIR+S  T + +P+ E+DGH GPV
Sbjct: 324 QRVITAAIGQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPV 383

Query: 362 THLHMDPYKIVTGGPEDPYVNIWQADTGNQTNSLICS----PLDSGGCCGLAADGFCIVT 529
           T LHMDPYKIVTGGPED +VN+W+ DTG QTN+L CS    P  + GC  +AADG  IVT
Sbjct: 384 TLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVT 443

Query: 530 AGYNQDEGVLRFRDFNNAVCSGSSS-EQITGSKFWGP 637
           A    ++G++ FRDF +A C  SSS E    SKFW P
Sbjct: 444 ASCGTEDGLVWFRDFTDATCPVSSSHEDKPASKFWDP 480


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  254 bits (648), Expect = 2e-65
 Identities = 125/214 (58%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
 Frame = +2

Query: 2   SMSKDSKVRVWDA--SISSSGRNSSCVGMTSVPGVPVAMKCHDSLLYMAAGSFIEAVDLR 175
           ++S+DSKVRVWD   + SS+ R S CVGM SVPG P+ MKCH+SLLY+AAGS + A DLR
Sbjct: 278 TISRDSKVRVWDTGTATSSAVRTSCCVGMASVPGTPLNMKCHESLLYVAAGSSVAAFDLR 337

Query: 176 TMRRVFRTSTNQGKLYSFDIMPSRFLACTGGLGRAMLWDIRRSTATGEADPMAELDGHIG 355
           TM++V   + +Q KL SFD +PS++L CTGG GRAMLWD+RR+  + + +P+AELDGH G
Sbjct: 338 TMQKVITAAVHQPKLCSFDAVPSKYLICTGGNGRAMLWDVRRNQESLKPEPIAELDGHCG 397

Query: 356 PVTHLHMDPYKIVTGGPEDPYVNIWQADTGNQTNSLICSPLD--SGGCCGLAADGFCIVT 529
            VT LHMDPYKIVTGGP++ YVN+W+ DTG QTNSL+CS  D    GC  +  DG  I T
Sbjct: 398 QVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLCSSTDDAGSGCDAMTVDGCRITT 457

Query: 530 AGYNQDEGVLRFRDFNNAVCSGSSSEQITGSKFW 631
           A Y +D GVLRFRDFN+A    +  E    SKFW
Sbjct: 458 ASYYEDLGVLRFRDFNHATNPVTKLENEPSSKFW 491


Top