BLASTX nr result

ID: Atractylodes22_contig00014177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014177
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   167   1e-39
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   166   2e-39
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   165   3e-39
emb|CBI39815.3| unnamed protein product [Vitis vinifera]              165   3e-39

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = -1

Query: 529 SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 350
           SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN
Sbjct: 46  SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 105

Query: 349 LETLLVEETPRVKPKKPTAGRPV 281
           LETLLVEETPRVKPKKPTAGRP+
Sbjct: 106 LETLLVEETPRVKPKKPTAGRPM 128


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/83 (98%), Positives = 83/83 (100%)
 Frame = -1

Query: 529 SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 350
           SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN
Sbjct: 16  SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 75

Query: 349 LETLLVEETPRVKPKKPTAGRPV 281
           LETLLVEETPRVKPKKPTAGRP+
Sbjct: 76  LETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  166 bits (421), Expect = 2e-39
 Identities = 81/83 (97%), Positives = 83/83 (100%)
 Frame = -1

Query: 529 SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 350
           SIELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN
Sbjct: 16  SIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 75

Query: 349 LETLLVEETPRVKPKKPTAGRPV 281
           LETLLVEETPRVKPKKPTAGRP+
Sbjct: 76  LETLLVEETPRVKPKKPTAGRPL 98


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/83 (96%), Positives = 83/83 (100%)
 Frame = -1

Query: 529 SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 350
           SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSVRGNNIRYYILPDS+N
Sbjct: 16  SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSIN 75

Query: 349 LETLLVEETPRVKPKKPTAGRPV 281
           LETLLVEETPRVKPKKPTAGRP+
Sbjct: 76  LETLLVEETPRVKPKKPTAGRPM 98


>emb|CBI39815.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score =  165 bits (418), Expect = 3e-39
 Identities = 80/83 (96%), Positives = 83/83 (100%)
 Frame = -1

Query: 529 SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLN 350
           SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT+DHLSVRGNNIRYYILPDS+N
Sbjct: 9   SIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSVRGNNIRYYILPDSIN 68

Query: 349 LETLLVEETPRVKPKKPTAGRPV 281
           LETLLVEETPRVKPKKPTAGRP+
Sbjct: 69  LETLLVEETPRVKPKKPTAGRPM 91


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