BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014173
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    84   3e-14
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...    78   1e-12
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]               78   1e-12
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    75   9e-12
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    69   1e-09

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
 Frame = +2

Query: 353 ANPWATSADPFKQPTQQAHLADVNPLE---------PSELGAAFSTMTLDPQDDQWYMDS 505
           A+P      P  QPT  AH+A+V P           P  L  AF+TMTL   D  WYMDS
Sbjct: 308 AHPGILGPHP-SQPTHAAHMANVYPYPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWYMDS 366

Query: 506 GATSHLTADAGKL-TTPCVSSIKSVFVGNGN*VPVLGSGHTTLPHPTKPLSLRHVLHTPH 682
            ATSH+T++ G L +T   S++  V VGNG+  PV   GH TL +P++  SLR+VL  P 
Sbjct: 367 AATSHITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGTLSYPSRSFSLRNVLVCPA 426

Query: 683 VV 688
           +V
Sbjct: 427 IV 428


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +2

Query: 380 PFKQPTQQAHLADVNPLEPSELGAAFSTMTL-DPQDDQWYMDSGATSHLTADAG-KLTTP 553
           P+      AH     P   ++L  AF+T +L DP D QWYMDSGAT++LT+ AG  L   
Sbjct: 244 PYHSQQSNAHFRTPKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNNLQLS 303

Query: 554 CVSSI-KSVFVGNGN*VPVLGSGHTTLPHPTKPLSLRHVLHTPHVV 688
              SI KSV  GNG  +PV  +G   + +  +PL+L +VL TP ++
Sbjct: 304 LYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDII 349


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
 Frame = +2

Query: 380 PFKQPTQQAHLADVNPLEPSELGAAFSTMTL-DPQDDQWYMDSGATSHLTADAG-KLTTP 553
           P+      AH     P   ++L  AF+T +L DP D QWYMDSGAT++LT+ AG  L   
Sbjct: 240 PYHSQQSNAHFRTPKPESTADLAEAFNTFSLQDPPDSQWYMDSGATAYLTSGAGNNLQLS 299

Query: 554 CVSSI-KSVFVGNGN*VPVLGSGHTTLPHPTKPLSLRHVLHTPHVV 688
              SI KSV  GNG  +PV  +G   + +  +PL+L +VL TP ++
Sbjct: 300 LYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPLTLHNVLVTPDII 345


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 75.5 bits (184), Expect = 9e-12
 Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +2

Query: 398 QQAHLADVNPLE--PSELGAAFSTMTL-DPQDDQWYMDSGATSHLTADAGKLTTPC-VSS 565
           Q A +   N L   P+ L AAF T T+ DP D  WYMD+GAT+HLTA  G L +    SS
Sbjct: 266 QAAMVGSTNQLTQIPANLAAAFGTTTMPDPTDASWYMDTGATTHLTAQPGTLHSLFNSSS 325

Query: 566 IKSVFVGNGN*VPVLGSGHTTLPHPTKPLSLRHVLHTPHVV 688
             SV VGNG+ VP    G++ LP   +PL L +VL  P ++
Sbjct: 326 SPSVVVGNGSSVPTKAIGYSFLPSKIRPLHLHNVLVCPSII 366


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1679

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = +2

Query: 431 EPSELGAAFSTMTL-DPQDDQWYMDSGATSHLTADAGKLT---TPCVSSIKSVFVGNGN* 598
           + + L  +F+T TL  P  + WYMD+GAT+H+T+D G L+    P  +S   + VGNG+ 
Sbjct: 539 DQASLAGSFNTTTLHQPATNDWYMDTGATAHMTSDTGILSLSHPPNPNSPSHIVVGNGST 598

Query: 599 VPVLGSGHTTLPHPTKPLSLRHVLHTPHVV 688
           +PV   GH+ + HP    +LR +L +P ++
Sbjct: 599 IPVTSIGHSKICHPNCSFTLRDILCSPAII 628