BLASTX nr result

ID: Atractylodes22_contig00014104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014104
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...   423   e-116
emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]   423   e-116
ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y...   403   e-110
ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase Y...   403   e-110
ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108

>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  423 bits (1088), Expect = e-116
 Identities = 204/275 (74%), Positives = 235/275 (85%)
 Frame = +3

Query: 105 RRLSIVICSSSLKSPNSTEETRELLKQYGLDPDEFLSDPTPSKTRRKKEQQKSGRGKQVG 284
           R+ S+VI S   +   + EE + LL++YG D +EF+S+P+P  TRR+KE QK+G+GKQV 
Sbjct: 39  RKPSVVILSCKSEDGLANEEKKLLLERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVS 98

Query: 285 PPREQAKPRETHKLLQVLGGKARRKKLLSPKSMDVRPMMEVVKGAAFGILQAAGGCPTSL 464
           P  +   PR THKLLQVLGGKARRKKLLSPK MDVRPMMEVVKGAAF ILQ AGGCP SL
Sbjct: 99  P-EDPKPPRTTHKLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQVAGGCPASL 157

Query: 465 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLENSVIHTVR 644
           RPGRWLDLYSGTGSVGIEA+SRGCSEVHFVEMDPWVVSDVLRPNLEWTGFL+ SVIHTVR
Sbjct: 158 RPGRWLDLYSGTGSVGIEALSRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLDVSVIHTVR 217

Query: 645 VETYFERIRESAGKDGPFDYISVTPPYTQVDYEILMNQISESSVIGDDSFIVVEYPFRTD 824
           VE + ER  +  GKD  FDYISVTPPYT+VDYE+LM QIS S+++G+D+FIVVEYP R D
Sbjct: 218 VENFLERAMQFVGKDQSFDYISVTPPYTEVDYEVLMGQISSSALVGEDTFIVVEYPLRID 277

Query: 825 MLETCGCLVKLADRRFGRTHLAIYGPKWAQKKRRS 929
           ML++CGCLVK+ADRRFGRTHLAIYGPKWAQK+R+S
Sbjct: 278 MLDSCGCLVKIADRRFGRTHLAIYGPKWAQKRRKS 312


>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score =  423 bits (1088), Expect = e-116
 Identities = 204/275 (74%), Positives = 235/275 (85%)
 Frame = +3

Query: 105 RRLSIVICSSSLKSPNSTEETRELLKQYGLDPDEFLSDPTPSKTRRKKEQQKSGRGKQVG 284
           R+ S+VI S   +   + EE + LL++YG D +EF+S+P+P  TRR+KE QK+G+GKQV 
Sbjct: 39  RKPSVVILSCKSEDGLANEEKKLLLERYGYDANEFVSEPSPKTTRRRKELQKTGKGKQVS 98

Query: 285 PPREQAKPRETHKLLQVLGGKARRKKLLSPKSMDVRPMMEVVKGAAFGILQAAGGCPTSL 464
           P  +   PR THKLLQVLGGKARRKKLLSPK MDVRPMMEVVKGAAF ILQ AGGCP SL
Sbjct: 99  P-EDPKPPRTTHKLLQVLGGKARRKKLLSPKGMDVRPMMEVVKGAAFDILQVAGGCPASL 157

Query: 465 RPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLENSVIHTVR 644
           RPGRWLDLYSGTGSVGIEA+SRGCSEVHFVEMDPWVVSDVLRPNLEWTGFL+ SVIHTVR
Sbjct: 158 RPGRWLDLYSGTGSVGIEALSRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLDVSVIHTVR 217

Query: 645 VETYFERIRESAGKDGPFDYISVTPPYTQVDYEILMNQISESSVIGDDSFIVVEYPFRTD 824
           VE + ER  +  GKD  FDYISVTPPYT+VDYE+LM QIS S+++G+D+FIVVEYP R D
Sbjct: 218 VENFLERAMQFVGKDQSFDYISVTPPYTEVDYEVLMGQISSSALVGEDTFIVVEYPLRID 277

Query: 825 MLETCGCLVKLADRRFGRTHLAIYGPKWAQKKRRS 929
           ML++CGCLVK+ADRRFGRTHLAIYGPKWAQK+R+S
Sbjct: 278 MLDSCGCLVKIADRRFGRTHLAIYGPKWAQKRRKS 312


>ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 313

 Score =  403 bits (1036), Expect = e-110
 Identities = 197/284 (69%), Positives = 235/284 (82%), Gaps = 1/284 (0%)
 Frame = +3

Query: 78  SLISTPLMCRRLSIVICSSSLKSPNSTEETRELLKQYGLDPDEFLSDPTPSKTRRKKEQQ 257
           ++ S P      SI++CS    +   TE  ++LL+QYGLDP+EFLS+P+   T R++E +
Sbjct: 32  NICSKPSAHPSSSIIVCSYKSGNHTVTERKKKLLEQYGLDPNEFLSEPS---TNRRREMR 88

Query: 258 KSGRGKQVGPPREQAKP-RETHKLLQVLGGKARRKKLLSPKSMDVRPMMEVVKGAAFGIL 434
           K+G+GKQ+ P  E  KP R+THKLLQVLGG ARR KLLSPK +DVRPMMEVVKGAAF IL
Sbjct: 89  KTGKGKQIFP--EDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDIL 146

Query: 435 QAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSDVLRPNLEWTGF 614
           QAAGGCP SLRPGRWLDLYSGTGSVGIEA+SRGCSEVHFVEMDPWVVSDVLRPNLE TGF
Sbjct: 147 QAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGF 206

Query: 615 LENSVIHTVRVETYFERIRESAGKDGPFDYISVTPPYTQVDYEILMNQISESSVIGDDSF 794
            + SVIHT+RVE + ER  +  G + PFDYISVTPPYTQVDY +LM Q+S+S+++G+D+F
Sbjct: 207 FDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTF 266

Query: 795 IVVEYPFRTDMLETCGCLVKLADRRFGRTHLAIYGPKWAQKKRR 926
           IVVEYP RTDMLE+CGCL K+ DRRFGRTHLAIYGPKWA+KK++
Sbjct: 267 IVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIYGPKWAEKKKK 310


>ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 315

 Score =  403 bits (1036), Expect = e-110
 Identities = 197/284 (69%), Positives = 235/284 (82%), Gaps = 1/284 (0%)
 Frame = +3

Query: 78  SLISTPLMCRRLSIVICSSSLKSPNSTEETRELLKQYGLDPDEFLSDPTPSKTRRKKEQQ 257
           ++ S P      SI++CS    +   TE  ++LL+QYGLDP+EFLS+P+   T R++E +
Sbjct: 32  NICSKPSAHPSSSIIVCSYKSGNHTVTERKKKLLEQYGLDPNEFLSEPS---TNRRREMR 88

Query: 258 KSGRGKQVGPPREQAKP-RETHKLLQVLGGKARRKKLLSPKSMDVRPMMEVVKGAAFGIL 434
           K+G+GKQ+ P  E  KP R+THKLLQVLGG ARR KLLSPK +DVRPMMEVVKGAAF IL
Sbjct: 89  KTGKGKQIFP--EDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDIL 146

Query: 435 QAAGGCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSDVLRPNLEWTGF 614
           QAAGGCP SLRPGRWLDLYSGTGSVGIEA+SRGCSEVHFVEMDPWVVSDVLRPNLE TGF
Sbjct: 147 QAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLESTGF 206

Query: 615 LENSVIHTVRVETYFERIRESAGKDGPFDYISVTPPYTQVDYEILMNQISESSVIGDDSF 794
            + SVIHT+RVE + ER  +  G + PFDYISVTPPYTQVDY +LM Q+S+S+++G+D+F
Sbjct: 207 FDVSVIHTIRVENFIERADQLIGTERPFDYISVTPPYTQVDYGVLMGQLSKSALVGEDTF 266

Query: 795 IVVEYPFRTDMLETCGCLVKLADRRFGRTHLAIYGPKWAQKKRR 926
           IVVEYP RTDMLE+CGCL K+ DRRFGRTHLAIYGPKWA+KK++
Sbjct: 267 IVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIYGPKWAEKKKK 310


>ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|222847289|gb|EEE84836.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  398 bits (1022), Expect = e-108
 Identities = 198/280 (70%), Positives = 235/280 (83%), Gaps = 7/280 (2%)
 Frame = +3

Query: 108 RLSIVICSSSLKSPN--STEETRELLKQYGLDPDEFLSDPTPS----KTRRKKEQQKSGR 269
           R+S ++ SS   S N  ++E+ + L ++YGLDP++F S P+ S    KT+R+KE Q  GR
Sbjct: 41  RISTIVLSSYKNSGNGLTSEDKKALFEKYGLDPNQFPSQPSSSSPSLKTKRRKEIQNPGR 100

Query: 270 GKQVGPPREQAKP-RETHKLLQVLGGKARRKKLLSPKSMDVRPMMEVVKGAAFGILQAAG 446
           GKQV     + KP R TH+LLQVLGGKA+RKKLLSPK MDVRPMMEVVKG+AF ILQAAG
Sbjct: 101 GKQVREEDGEDKPQRTTHRLLQVLGGKAKRKKLLSPKGMDVRPMMEVVKGSAFDILQAAG 160

Query: 447 GCPTSLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSDVLRPNLEWTGFLENS 626
           GCP SLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVS+VL+PNLE TGFL+ S
Sbjct: 161 GCPASLRPGRWLDLYSGTGSVGIEAISRGCSEVHFVEMDPWVVSNVLQPNLECTGFLDVS 220

Query: 627 VIHTVRVETYFERIRESAGKDGPFDYISVTPPYTQVDYEILMNQISESSVIGDDSFIVVE 806
           VIHTVRVE++ ER  +  G+D  FD+ISVTPPYTQVDY ILM+QIS+S ++G+D+FIVVE
Sbjct: 221 VIHTVRVESFLERAEQFVGQDSAFDFISVTPPYTQVDYGILMDQISKSPIVGEDTFIVVE 280

Query: 807 YPFRTDMLETCGCLVKLADRRFGRTHLAIYGPKWAQKKRR 926
           YP RTDML++CGCLVK+ DRRFGRTHLAIYGP+WAQKKR+
Sbjct: 281 YPLRTDMLDSCGCLVKINDRRFGRTHLAIYGPEWAQKKRK 320


Top