BLASTX nr result

ID: Atractylodes22_contig00014099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014099
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31232.3| unnamed protein product [Vitis vinifera]              141   9e-32
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote...   129   6e-28
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222...   128   8e-28
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2...   126   4e-27
ref|NP_001154686.1| double-stranded-RNA-binding protein 4 [Arabi...   122   4e-26

>emb|CBI31232.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  141 bits (356), Expect = 9e-32
 Identities = 78/144 (54%), Positives = 101/144 (70%), Gaps = 4/144 (2%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFLSLSPDGTQEDDC-LYKSLLQELAQKKGLLL 177
           VTI+  TYE P+F  TLKDAEHAAAK+A +SLSP G QEDD  +YK+LLQE+A+K+G  L
Sbjct: 194 VTIEEQTYESPDFFPTLKDAEHAAAKLALMSLSPAGFQEDDYGVYKNLLQEMARKEGYQL 253

Query: 178 PIYATNRNGPPHMSSFASTVQIAGECFEGQEARTKKQAEMNAAKVAYTALTEGGPRTNNA 357
           P+Y+T ++G  HM +F STV+I GE F GQ+A+TKK AEMNAAK AYT L E     N+ 
Sbjct: 254 PVYSTEKSGVSHMPTFLSTVEIEGETFVGQKAKTKKLAEMNAAKAAYTHLKERRSNLNHK 313

Query: 358 AVF---SDIPMVGASDFGSSSFQT 420
           ++     ++  V +S F S S  T
Sbjct: 314 SLSPSGQELRGVESSSFNSESSGT 337



 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
 Frame = +1

Query: 133 KSLLQELAQKKGLLLPIYATNRNGPPHMSSFASTVQIAGECFE-GQEARTKKQAEMNAAK 309
           K+ LQEL  +K    P Y+T ++GPPH  +F +TV + G  F     AR+ K+A+ NAA 
Sbjct: 3   KTRLQELCHRKRWNPPEYSTRKDGPPHNPTFIATVSVGGLSFSTDHPARSSKEAQSNAAG 62

Query: 310 VAYTALTE--GGPRTNNAAVFSDIPMVGAS 393
           +A   LT+    P  ++++V +D+  + A+
Sbjct: 63  LAIQYLTDPKPPPLADSSSVITDVKNIPAT 92


>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
           sativus]
          Length = 247

 Score =  129 bits (323), Expect = 6e-28
 Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFLSLSPDGTQEDDC--LYKSLLQELAQKKGLL 174
           V IDG TYE  EF  TLKDAE+A AKVA +SL  DG QED    LYK+LLQE+AQK GL 
Sbjct: 40  VEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLG 99

Query: 175 LPIYATNRNGPPHMSSFASTVQIAGECFEGQEARTKKQAEMNAAKVAYTALTEGGP--RT 348
           LP Y+T+++G  H+  F STV++  E FEG+ +RTKKQAEM+AAKVAY  + EG     T
Sbjct: 100 LPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSIST 159

Query: 349 NNAAVFSDIPMVGASDFGSSS 411
              A   D+ +    D  +SS
Sbjct: 160 RKRAPSCDLALEVPRDIATSS 180



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +1

Query: 127 LYKSLLQELAQKKGLLLPIYATNRNGPPHMSSFASTVQIAGECFEGQEAR-TKKQAEMNA 303
           LYK+ LQ  +QK+GL LP+Y   R+GPPH S F   V+I G+ +E  E   T K AE   
Sbjct: 4   LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAV 63

Query: 304 AKVAYTALTEGGPRTNN 354
           AKVA  +L + G + ++
Sbjct: 64  AKVALMSLCQDGAQEDS 80


>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
          Length = 446

 Score =  128 bits (322), Expect = 8e-28
 Identities = 75/141 (53%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFLSLSPDGTQEDDC--LYKSLLQELAQKKGLL 174
           V IDG TYE  EF  TLKDAE+A AKVA +SL  DG QED    LYK+LLQE+AQK GL 
Sbjct: 239 VEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLG 298

Query: 175 LPIYATNRNGPPHMSSFASTVQIAGECFEGQEARTKKQAEMNAAKVAYTALTEGGP--RT 348
           LP Y+T+++G  H+  F STV++  E FEG+ +RTKKQAEM+AAKVAY  + EG     T
Sbjct: 299 LPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSIST 358

Query: 349 NNAAVFSDIPMVGASDFGSSS 411
              A   D+ +    D  +SS
Sbjct: 359 RKRAPSCDLALEIPRDIATSS 379



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +1

Query: 127 LYKSLLQELAQKKGLLLPIYATNRNGPPHMSSFASTVQIAGECFEGQEAR-TKKQAEMNA 303
           LYK+ LQ  +QK+GL LP+Y   R+GPPH S F   V+I G+ +E  E   T K AE   
Sbjct: 203 LYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAENAV 262

Query: 304 AKVAYTALTEGGPRTNN 354
           AKVA  +L + G + ++
Sbjct: 263 AKVALMSLCQDGAQEDS 279


>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  126 bits (316), Expect = 4e-27
 Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 6/117 (5%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFLSLSPDGTQE------DDCLYKSLLQELAQK 162
           VT++G T+E  E+ +TL  AEHAAAK A +SL P+G +E      D+  YK+LLQELAQ+
Sbjct: 123 VTVNGQTFESLEYFSTLNKAEHAAAKAALMSLLPNGVEEVSFLFMDESGYKNLLQELAQR 182

Query: 163 KGLLLPIYATNRNGPPHMSSFASTVQIAGECFEGQEARTKKQAEMNAAKVAYTALTE 333
           +G  LP Y+TN++G  H+ +F STV+I GE F GQ A+TKKQAEM+AAK AYTAL +
Sbjct: 183 EGCGLPTYSTNKSGEAHVPTFISTVEIEGEIFTGQGAKTKKQAEMSAAKTAYTALKQ 239



 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFL-------SLSPDGTQED-DCLYKSLLQELA 156
           VT++  ++  P    T K A++ AAK+A+        S SP     D   L+KS LQ  A
Sbjct: 37  VTVNNISFHSPSPSNTSKKAQNDAAKLAYEHFSISRPSPSPSPPVSDMQRLFKSQLQTYA 96

Query: 157 QKKGLLLPIYATNRNGPPHMSSFASTVQIAGECFEGQE-ARTKKQAEMNAAKVAYTALTE 333
           QK+   LP+Y+  R GPPH S F   V + G+ FE  E   T  +AE  AAK A  +L  
Sbjct: 97  QKRNFALPVYSCERVGPPHSSRFKCKVTVNGQTFESLEYFSTLNKAEHAAAKAALMSLLP 156

Query: 334 GG 339
            G
Sbjct: 157 NG 158


>ref|NP_001154686.1| double-stranded-RNA-binding protein 4 [Arabidopsis thaliana]
           gi|197267565|dbj|BAG69145.1| dsRNA-binding protein
           [Arabidopsis thaliana] gi|332646874|gb|AEE80395.1|
           double-stranded-RNA-binding protein 4 [Arabidopsis
           thaliana]
          Length = 329

 Score =  122 bits (307), Expect = 4e-26
 Identities = 61/112 (54%), Positives = 79/112 (70%)
 Frame = +1

Query: 1   VTIDGDTYEGPEFCTTLKDAEHAAAKVAFLSLSPDGTQEDDCLYKSLLQELAQKKGLLLP 180
           VT  G T++  EF  TLK AEHAAAK+A  SL+P   +  D  YK+LLQE+AQK+  LLP
Sbjct: 40  VTFCGQTFQSSEFFPTLKSAEHAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLP 99

Query: 181 IYATNRNGPPHMSSFASTVQIAGECFEGQEARTKKQAEMNAAKVAYTALTEG 336
            YAT  +GP H  +F STV+ AG+ F G+EA+TKK AEM+AAKVA+ ++  G
Sbjct: 100 FYATATSGPSHAPTFTSTVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNG 151



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +1

Query: 121 DCLYKSLLQELAQKKGLLLPIYATNRNGPPHMSSFASTVQIAGECFEGQE-ARTKKQAEM 297
           D +YK  LQ  A +  L LP+YA  R GPPH   F   V   G+ F+  E   T K AE 
Sbjct: 2   DHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEH 61

Query: 298 NAAKVAYTALTEGGP 342
            AAK+A  +LT   P
Sbjct: 62  AAAKIAVASLTPQSP 76


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