BLASTX nr result

ID: Atractylodes22_contig00014037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014037
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   247   8e-64
ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   241   3e-62
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g...   231   5e-59
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...   228   3e-58
ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein hel...   228   5e-58

>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
           [Vitis vinifera]
          Length = 2177

 Score =  247 bits (630), Expect = 8e-64
 Identities = 128/160 (80%), Positives = 135/160 (84%), Gaps = 2/160 (1%)
 Frame = +2

Query: 2   EVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEHQEQRKTIEGKMMGLAPDLAAI 181
           EVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARAE QE+RK IE +M G   DLAAI
Sbjct: 320 EVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAEDQEERKKIEEEMTGSGSDLAAI 379

Query: 182 LEQLHATRATAKERQKNLEKSIQEEARRLKDESG--GXXXXXXXXXXXAENGWLNGQRQL 355
           LEQLHATRATAKERQK LEKSI+EEARRLKDESG  G           AE+GWL GQRQL
Sbjct: 380 LEQLHATRATAKERQKILEKSIREEARRLKDESGGDGDRDRRGPVDRDAESGWLKGQRQL 439

Query: 356 LDLESIAFHQGGLLMANKKCELPLGSYRNHSKGYEEVHVP 475
           LDL+ IAFHQGG LMANKKCELP GSYR+HSKGYEEVHVP
Sbjct: 440 LDLDGIAFHQGGFLMANKKCELPTGSYRHHSKGYEEVHVP 479


>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
           predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  241 bits (616), Expect = 3e-62
 Identities = 122/160 (76%), Positives = 137/160 (85%), Gaps = 2/160 (1%)
 Frame = +2

Query: 2   EVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEHQEQRKTIEGKMMGLAPDLAAI 181
           EVETKLLVHLQFDKFSLIK+LLRNRLKIVWCTRLARA+ QE+RK IE +MMGL PDLA I
Sbjct: 320 EVETKLLVHLQFDKFSLIKFLLRNRLKIVWCTRLARAKDQEERKQIEEEMMGLGPDLAGI 379

Query: 182 LEQLHATRATAKERQKNLEKSIQEEARRLKDESG--GXXXXXXXXXXXAENGWLNGQRQL 355
           LEQLHATRATAKERQKNLEKSI+EEARRLKDE+G  G           AE+GW+ GQ Q+
Sbjct: 380 LEQLHATRATAKERQKNLEKSIREEARRLKDETGGDGDRDRRGLVDRDAESGWVKGQPQM 439

Query: 356 LDLESIAFHQGGLLMANKKCELPLGSYRNHSKGYEEVHVP 475
           LDL+SIAF QGGLLMANKKC+LP+GS+++  KGYEEVHVP
Sbjct: 440 LDLDSIAFEQGGLLMANKKCDLPVGSFKHQKKGYEEVHVP 479


>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
           gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 2171

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/159 (71%), Positives = 134/159 (84%), Gaps = 2/159 (1%)
 Frame = +2

Query: 5   VETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEHQEQRKTIEGKMMGLAPDLAAIL 184
           VE KLL+HLQF+KFSL+K+LLRNRLK+VWCTRLARAE QE+RK IE +M GL P+L AI+
Sbjct: 315 VENKLLMHLQFEKFSLVKFLLRNRLKVVWCTRLARAEDQEERKRIEEEMRGLGPELTAIV 374

Query: 185 EQLHATRATAKERQKNLEKSIQEEARRLKDESG--GXXXXXXXXXXXAENGWLNGQRQLL 358
           EQLHATRATAKER++NL+KSI EEARRLKDE+G  G           +E+GW+ GQRQ+L
Sbjct: 375 EQLHATRATAKEREENLQKSINEEARRLKDETGGDGGRRRRDVADRDSESGWVKGQRQML 434

Query: 359 DLESIAFHQGGLLMANKKCELPLGSYRNHSKGYEEVHVP 475
           DLES+AF QGGLLMANKKC+LP GSYR+H KGY+EVHVP
Sbjct: 435 DLESLAFDQGGLLMANKKCDLPPGSYRSHGKGYDEVHVP 473


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
           [Cucumis sativus]
          Length = 2175

 Score =  228 bits (582), Expect = 3e-58
 Identities = 118/160 (73%), Positives = 131/160 (81%), Gaps = 2/160 (1%)
 Frame = +2

Query: 2   EVETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEHQEQRKTIEGKMMGLAPDLAAI 181
           E+ETKLLVHLQF+KFSL+K+LLRNRLK+VWCTRLAR+E QE+RK IE +MM L PDLAAI
Sbjct: 318 EIETKLLVHLQFEKFSLVKFLLRNRLKVVWCTRLARSEDQEERKKIEEEMMHLGPDLAAI 377

Query: 182 LEQLHATRATAKERQKNLEKSIQEEARRLKDESGG--XXXXXXXXXXXAENGWLNGQRQL 355
           LEQLHATRATAKERQKNLEKSI+EEARRLKDESGG              +NG L GQ QL
Sbjct: 378 LEQLHATRATAKERQKNLEKSIREEARRLKDESGGDAERGRRDPVERDMDNGGLTGQSQL 437

Query: 356 LDLESIAFHQGGLLMANKKCELPLGSYRNHSKGYEEVHVP 475
           LDL+SIAF QG LLMAN KC LP GSYR+  KGYEE+HVP
Sbjct: 438 LDLDSIAFQQGSLLMANNKCVLPDGSYRHLGKGYEEIHVP 477


>ref|NP_173520.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis
           thaliana] gi|334182730|ref|NP_001185050.1| putative U5
           small nuclear ribonucleoprotein helicase [Arabidopsis
           thaliana] gi|4836892|gb|AAD30595.1|AC007369_5 Putative
           RNA helicase [Arabidopsis thaliana]
           gi|332191925|gb|AEE30046.1| putative U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332191926|gb|AEE30047.1| putative U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2171

 Score =  228 bits (580), Expect = 5e-58
 Identities = 111/159 (69%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
 Frame = +2

Query: 5   VETKLLVHLQFDKFSLIKYLLRNRLKIVWCTRLARAEHQEQRKTIEGKMMGLAPDLAAIL 184
           VE KLL+HLQ++KFSL+K+LLRNRLK+VWCTRLARAE QE+R  IE +M GL P+L AI+
Sbjct: 315 VEDKLLMHLQYEKFSLVKFLLRNRLKVVWCTRLARAEDQEERNRIEEEMRGLGPELTAIV 374

Query: 185 EQLHATRATAKERQKNLEKSIQEEARRLKDESG--GXXXXXXXXXXXAENGWLNGQRQLL 358
           EQLHATRATAKER++NL+KSI EEARRLKDE+G  G           +E+GW+ GQRQ+L
Sbjct: 375 EQLHATRATAKEREENLQKSINEEARRLKDETGGDGGRGRRDVADRDSESGWVKGQRQML 434

Query: 359 DLESIAFHQGGLLMANKKCELPLGSYRNHSKGYEEVHVP 475
           DLES+AF QGGLLMANKKC+LP GSYR+H KGY+EVHVP
Sbjct: 435 DLESLAFDQGGLLMANKKCDLPPGSYRSHGKGYDEVHVP 473


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