BLASTX nr result

ID: Atractylodes22_contig00013968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013968
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, ...   144   1e-32
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [...   144   1e-32
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   143   2e-32
emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]   143   2e-32
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   138   7e-31

>ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 303

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/102 (67%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
 Frame = +3

Query: 48  DDGSXXXXXXXXXDPNAPKRAISGFMFFSQIERENVKKDNPGIAFQEIGRVLGDRWHKLS 227
           DDGS         DPNAPKRAISGFMFFS++EREN+KK NPGI+F E+GRVLGD+W+K+S
Sbjct: 202 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 261

Query: 228 AEDREPYEAKARADKKRYRDEISGYK-PQAANPGPGNGSDTA 350
           AE++EPYE+KAR DKKRY++EISGYK PQ  N   GN SD+A
Sbjct: 262 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 303


>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
          Length = 642

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/102 (67%), Positives = 83/102 (81%), Gaps = 1/102 (0%)
 Frame = +3

Query: 48  DDGSXXXXXXXXXDPNAPKRAISGFMFFSQIERENVKKDNPGIAFQEIGRVLGDRWHKLS 227
           DDGS         DPNAPKRAISGFMFFS++EREN+KK NPGI+F E+GRVLGD+W+K+S
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 228 AEDREPYEAKARADKKRYRDEISGYK-PQAANPGPGNGSDTA 350
           AE++EPYE+KAR DKKRY++EISGYK PQ  N   GN SD+A
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642


>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score =  143 bits (361), Expect = 2e-32
 Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = +3

Query: 45  EDDGSXXXXXXXXXDPNAPKRAISGFMFFSQIERENVKKDNPGIAFQEIGRVLGDRWHKL 224
           ++DGS         DPNAPKRA+SGFMFFSQ EREN+KK  PGIAF E+GRVLGD+W K+
Sbjct: 541 DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKM 600

Query: 225 SAEDREPYEAKARADKKRYRDEISGYK--PQAANPGPGNGSDT 347
           +AE++EPYEAKA+ADKKRYRDEISGYK  PQ  N   GN SD+
Sbjct: 601 TAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDS 643


>emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
          Length = 644

 Score =  143 bits (361), Expect = 2e-32
 Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 2/103 (1%)
 Frame = +3

Query: 45  EDDGSXXXXXXXXXDPNAPKRAISGFMFFSQIERENVKKDNPGIAFQEIGRVLGDRWHKL 224
           ++DGS         DPNAPKRA+SGFMFFSQ EREN+KK  PGIAF E+GRVLGD+W K+
Sbjct: 541 DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKM 600

Query: 225 SAEDREPYEAKARADKKRYRDEISGYK--PQAANPGPGNGSDT 347
           +AE++EPYEAKA+ADKKRYRDEISGYK  PQ  N   GN SD+
Sbjct: 601 TAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDS 643


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/89 (73%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
 Frame = +3

Query: 87  DPNAPKRAISGFMFFSQIERENVKKDNPGIAFQEIGRVLGDRWHKLSAEDREPYEAKARA 266
           DPNAPKRA+SGFMFFSQ+EREN+KK NPGI+F ++GRVLG++W  LSAE++EPYEAKA+A
Sbjct: 554 DPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQA 613

Query: 267 DKKRYRDEISGYK-PQAANPGPGNGSDTA 350
           DKKRY+DEISGYK PQ  N   GN SD+A
Sbjct: 614 DKKRYKDEISGYKNPQPMNVDSGNESDSA 642


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