BLASTX nr result

ID: Atractylodes22_contig00013955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013955
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding prote...    92   6e-17
ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidops...    89   3e-16
ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Ar...    89   3e-16
ref|XP_002517589.1| protein with unknown function [Ricinus commu...    89   4e-16
ref|XP_002872167.1| zinc finger (Ran-binding) family protein [Ar...    89   5e-16

>ref|XP_003522624.1| PREDICTED: uncharacterized RNA-binding protein C17H9.04c-like
           [Glycine max]
          Length = 159

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +3

Query: 42  SAFGFTAGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDD 170
           S+FGFT GPDVRPGDWYC VGNCGAHNFASRSSCFKCGA K+D
Sbjct: 48  SSFGFTTGPDVRPGDWYCTVGNCGAHNFASRSSCFKCGAPKED 90


>ref|NP_188189.1| Ran BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
           gi|11994340|dbj|BAB02299.1| zinc finger protein-like;
           Ser/Thr protein kinase-like protein [Arabidopsis
           thaliana] gi|89274153|gb|ABD65597.1| At3g15680
           [Arabidopsis thaliana] gi|332642192|gb|AEE75713.1| Ran
           BP2/NZF zinc finger-like protein [Arabidopsis thaliana]
          Length = 164

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +3

Query: 42  SAFGFTAGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDD 170
           SAFGFT G DVRPGDWYC VGNCG HNFASRS+CFKCG FKD+
Sbjct: 50  SAFGFTTGSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDE 92


>ref|XP_002882957.1| zinc finger (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297328797|gb|EFH59216.1| zinc finger
           (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 164

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/43 (83%), Positives = 38/43 (88%)
 Frame = +3

Query: 42  SAFGFTAGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDD 170
           SAFGFT G DVRPGDWYC VGNCG HNFASRS+CFKCG FKD+
Sbjct: 50  SAFGFTTGSDVRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDE 92


>ref|XP_002517589.1| protein with unknown function [Ricinus communis]
           gi|223543221|gb|EEF44753.1| protein with unknown
           function [Ricinus communis]
          Length = 152

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +3

Query: 42  SAFGFTAGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLA 176
           S+FGF+ G DVRPGDWYC  GNCGAHNFASRSSCFKCG +KDD A
Sbjct: 46  SSFGFSTGSDVRPGDWYCTAGNCGAHNFASRSSCFKCGVYKDDSA 90


>ref|XP_002872167.1| zinc finger (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318004|gb|EFH48426.1| zinc finger
           (Ran-binding) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 168

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 42  SAFGFTAGPDVRPGDWYCNVGNCGAHNFASRSSCFKCGAFKDDLA 176
           S+FGF  GPDVRPGDWYCNVG+CG HNFA+RSSCFKCGA KD+ +
Sbjct: 49  SSFGFNTGPDVRPGDWYCNVGSCGTHNFANRSSCFKCGAAKDEFS 93


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