BLASTX nr result

ID: Atractylodes22_contig00013953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013953
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...   105   1e-20
gb|AAM65969.1| unknown [Arabidopsis thaliana]                         105   1e-20
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209...   103   3e-20
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   103   3e-20
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   101   2e-19

>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  105 bits (262), Expect = 1e-20
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = -1

Query: 567 QPPALVAHGSFDLQEGRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVH 388
           QP AL++HGS DL E  D  EE+LRQFDMN+AYGPC+GM R+DRW+RA  LG+NPP ++ 
Sbjct: 45  QPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLGMNPPNEIE 104

Query: 387 RLLTTAANEVCSDSLWDGRV 328
           +LL T   +V  D LW GRV
Sbjct: 105 KLLKT--GKVQQDCLWQGRV 122


>gb|AAM65969.1| unknown [Arabidopsis thaliana]
          Length = 124

 Score =  105 bits (261), Expect = 1e-20
 Identities = 48/80 (60%), Positives = 59/80 (73%)
 Frame = -1

Query: 567 QPPALVAHGSFDLQEGRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVH 388
           QP AL++HGS DL E  D  EE+LRQFDMN+ YGPC+GM R+DRWQRA  LG+NPP ++ 
Sbjct: 47  QPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLGMNPPNEIE 106

Query: 387 RLLTTAANEVCSDSLWDGRV 328
           +LL T   +V  D LW GRV
Sbjct: 107 KLLKT--GKVQQDCLWQGRV 124


>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
           gi|449523375|ref|XP_004168699.1| PREDICTED:
           uncharacterized protein LOC101228956 [Cucumis sativus]
          Length = 125

 Score =  103 bits (258), Expect = 3e-20
 Identities = 51/80 (63%), Positives = 59/80 (73%)
 Frame = -1

Query: 567 QPPALVAHGSFDLQEGRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVH 388
           QP ALV+HGS DLQ+   V+E  LRQFDMN AYGPC+GM RM RW+RA SLGLNPPKD+ 
Sbjct: 48  QPAALVSHGSLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIG 107

Query: 387 RLLTTAANEVCSDSLWDGRV 328
            LL   A +V  + LWD RV
Sbjct: 108 TLL--KAGKVQLECLWDSRV 125


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  103 bits (258), Expect = 3e-20
 Identities = 47/80 (58%), Positives = 59/80 (73%)
 Frame = -1

Query: 567 QPPALVAHGSFDLQEGRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDVH 388
           QP AL++HGS DL E  D  EE+LRQFDMN+ YGPC+GM R+DRW+RA  LG+NPP ++ 
Sbjct: 47  QPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIE 106

Query: 387 RLLTTAANEVCSDSLWDGRV 328
           +LL T   +V  D LW GRV
Sbjct: 107 KLLKT--GKVQQDCLWQGRV 124


>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  101 bits (251), Expect = 2e-19
 Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = -1

Query: 567 QPPALVAHG-SFDLQEGRDVTEEVLRQFDMNMAYGPCVGMKRMDRWQRAASLGLNPPKDV 391
           QP AL++HG + DLQ+  D  EEVLRQFDMNMAYGPC+GM R+ RW+RA  LGLNPPK +
Sbjct: 48  QPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRLGLNPPKQI 107

Query: 390 HRLLTTAANEVCSDSLWDGRV 328
             LL     +V S+ LWDGRV
Sbjct: 108 EDLL--KGGKVNSECLWDGRV 126


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