BLASTX nr result

ID: Atractylodes22_contig00013904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013904
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD36744.1| APETALA2B [Ipomoea nil]                                69   4e-10
emb|CAR92295.1| relative to APETALA2 1 [Solanum tuberosum subsp....    68   7e-10
ref|NP_001233891.1| AP2 transcription factor SlAP2e [Solanum lyc...    56   4e-06

>dbj|BAD36744.1| APETALA2B [Ipomoea nil]
          Length = 459

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 53/133 (39%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
 Frame = -1

Query: 373 VNVEISSNAGDEEHSYSCSDLAYSFDILKPSNREDDQDF----RSGIMVTKQLFPEIDGD 206
           VN E SS AGD+E  YSCSD  Y+F+IL+    ED +++      G   T +LFP   G+
Sbjct: 35  VNAETSSTAGDDE--YSCSD-GYAFEILR--REEDGKEYGESENRGGFETMELFPLSGGE 89

Query: 205 GGL---RQHQWLDVRG--GSAVDEREFTLXXXXXXXXXXXQVXXXXXXXXXXXXXXXGVT 41
             L   +Q QWLD+    G   D R   L            V               GVT
Sbjct: 90  AALFNQQQQQWLDLSANYGIVADPRIMILPPQRPQ------VKKSRRGPRSRSSQYRGVT 143

Query: 40  FYRRTGRWESHIW 2
           FYRRTGRWESHIW
Sbjct: 144 FYRRTGRWESHIW 156


>emb|CAR92295.1| relative to APETALA2 1 [Solanum tuberosum subsp. andigenum]
          Length = 454

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 52/133 (39%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
 Frame = -1

Query: 373 VNVEISSNAGDEEHSYSCSDL---AYSFDILKPSNREDDQDFRSGIMVTKQLFPEIDGDG 203
           VNVE SS AGD+E   SCSD     Y+F+IL+        D+     VTK+LFP   G+ 
Sbjct: 41  VNVETSSTAGDDEF-ISCSDQRTDGYAFEILR-------ADYEGNEFVTKELFPLTGGES 92

Query: 202 GL---RQHQWLDVRG---GSAVDEREFTLXXXXXXXXXXXQVXXXXXXXXXXXXXXXGVT 41
                +Q QWLD+ G   G  +++R               QV               GVT
Sbjct: 93  AAPPSQQQQWLDLSGNYSGVPMEQR-----IVVGPPQLRQQVKKSRRGPRSRSSQYRGVT 147

Query: 40  FYRRTGRWESHIW 2
           FYRRTGRWESHIW
Sbjct: 148 FYRRTGRWESHIW 160


>ref|NP_001233891.1| AP2 transcription factor SlAP2e [Solanum lycopersicum]
           gi|333123376|gb|AEF28823.1| AP2 transcription factor
           SlAP2e [Solanum lycopersicum]
          Length = 474

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 19/142 (13%)
 Frame = -1

Query: 370 NVEISSNAGDEEHSYSCSD--LAYSFDILK--------PSNREDDQDFRSGI------MV 239
           N E +++AGDE+   SC+    A++F ILK         SN +D++ +           V
Sbjct: 32  NAEATTSAGDED---SCAGELXAFNFGILKVEGAETSRSSNNDDEEGYGKNQRVTHSQFV 88

Query: 238 TKQLFPEIDGDGGLRQHQWL---DVRGGSAVDEREFTLXXXXXXXXXXXQVXXXXXXXXX 68
           T+QLFP  DG+   +Q   +     R G+++   +  +           QV         
Sbjct: 89  TRQLFPVDDGELNRKQTDRVILSSARSGTSIGFGDVRIIQQQRTEQPKQQVKKSRRGPRS 148

Query: 67  XXXXXXGVTFYRRTGRWESHIW 2
                 GVTFYRRTGRWESHIW
Sbjct: 149 RSSQYRGVTFYRRTGRWESHIW 170


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