BLASTX nr result

ID: Atractylodes22_contig00013879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013879
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330567.1| predicted protein [Populus trichocarpa] gi|2...   274   1e-71
ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vi...   271   7e-71
emb|CBI39868.3| unnamed protein product [Vitis vinifera]              271   7e-71
ref|XP_002894512.1| F-box family protein [Arabidopsis lyrata sub...   267   2e-69
ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana] gi|75...   265   8e-69

>ref|XP_002330567.1| predicted protein [Populus trichocarpa] gi|222872125|gb|EEF09256.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  274 bits (701), Expect = 1e-71
 Identities = 132/232 (56%), Positives = 179/232 (77%), Gaps = 1/232 (0%)
 Frame = +2

Query: 2    EVKLVSCSYITSEAVRELATCSALEVLNLLGCRSVADSCLTNISCLAFLTSLDLGGADVT 181
            EV+L+SC  ITSE V++LA   +LEVL+L GC+SVADSCL++ISCL  LT+L+L GAD+T
Sbjct: 352  EVRLLSCGLITSETVKKLAFSRSLEVLDLCGCKSVADSCLSSISCLQRLTTLNLTGADIT 411

Query: 182  DAGIAVLGKGNAPISFLSLRGCKRVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAI 361
            D+G++V+G+GN PIS+L LRGCKR+TDKGI+ LL   G I+ TLS+LDLG+MPGI+DN I
Sbjct: 412  DSGLSVIGQGNTPISYLCLRGCKRITDKGISFLLCGGGAIALTLSALDLGYMPGISDNGI 471

Query: 362  ITVTDACIGLTEMRIRNCFHVTDASVKALALKGRFQGESKRLRRLDLYNCTALSVESFKF 541
            +T+      +TE+ IR+CF+VTD +++ALA K R Q  SK+L R+D++NC  LS ++ K 
Sbjct: 472  LTIATFGREITELCIRSCFYVTDLAMRALAAKRRSQDRSKQLCRVDIFNCVGLSADALKL 531

Query: 542  LKKPLFCGLQWIGIGRTRLISGD-FGLAEVCEERQWLTICTGGCEVGCHDAW 694
            L+KPLF GL WIGIG+T L S +   + E+ +ER WLT+C  GCE+ CHD W
Sbjct: 532  LRKPLFRGLHWIGIGKTHLSSNEGTMITEIQKERPWLTLCLDGCEMQCHDGW 583


>ref|XP_002265565.2| PREDICTED: F-box protein At-B-like [Vitis vinifera]
          Length = 619

 Score =  271 bits (694), Expect = 7e-71
 Identities = 136/231 (58%), Positives = 176/231 (76%)
 Frame = +2

Query: 2    EVKLVSCSYITSEAVRELATCSALEVLNLLGCRSVADSCLTNISCLAFLTSLDLGGADVT 181
            EVKL SC+ ITSE V ++A+   LEVL+L GC+S+ADS L++I+CL  LT+L+LGGADVT
Sbjct: 382  EVKLSSCNLITSETVHKMASSRRLEVLDLFGCKSIADSSLSSITCLNKLTTLNLGGADVT 441

Query: 182  DAGIAVLGKGNAPISFLSLRGCKRVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAI 361
            D G++VL +G +PIS L LRGCKRVTDKG++LL    G ISKTL++LDLGHMPGI+D AI
Sbjct: 442  DRGLSVLSQGYSPISHLCLRGCKRVTDKGVSLLFHGCGVISKTLTALDLGHMPGISDKAI 501

Query: 362  ITVTDACIGLTEMRIRNCFHVTDASVKALALKGRFQGESKRLRRLDLYNCTALSVESFKF 541
            +T+     G+TE+ IR CF+VTD+SV+ALA K R Q   K LR+LDL++CT LSV+S + 
Sbjct: 502  LTIAAVGTGITELCIRYCFYVTDSSVEALATKRRLQDGRKPLRKLDLFHCTGLSVKSLES 561

Query: 542  LKKPLFCGLQWIGIGRTRLISGDFGLAEVCEERQWLTICTGGCEVGCHDAW 694
            LK+P F  L+WIG+GRT  +SG     E+  ER WLT+C  GCE+GCHD W
Sbjct: 562  LKRPFFQALKWIGLGRT-CLSGKAN--EILNERPWLTLCLDGCEMGCHDGW 609


>emb|CBI39868.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  271 bits (694), Expect = 7e-71
 Identities = 136/231 (58%), Positives = 176/231 (76%)
 Frame = +2

Query: 2    EVKLVSCSYITSEAVRELATCSALEVLNLLGCRSVADSCLTNISCLAFLTSLDLGGADVT 181
            EVKL SC+ ITSE V ++A+   LEVL+L GC+S+ADS L++I+CL  LT+L+LGGADVT
Sbjct: 370  EVKLSSCNLITSETVHKMASSRRLEVLDLFGCKSIADSSLSSITCLNKLTTLNLGGADVT 429

Query: 182  DAGIAVLGKGNAPISFLSLRGCKRVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAI 361
            D G++VL +G +PIS L LRGCKRVTDKG++LL    G ISKTL++LDLGHMPGI+D AI
Sbjct: 430  DRGLSVLSQGYSPISHLCLRGCKRVTDKGVSLLFHGCGVISKTLTALDLGHMPGISDKAI 489

Query: 362  ITVTDACIGLTEMRIRNCFHVTDASVKALALKGRFQGESKRLRRLDLYNCTALSVESFKF 541
            +T+     G+TE+ IR CF+VTD+SV+ALA K R Q   K LR+LDL++CT LSV+S + 
Sbjct: 490  LTIAAVGTGITELCIRYCFYVTDSSVEALATKRRLQDGRKPLRKLDLFHCTGLSVKSLES 549

Query: 542  LKKPLFCGLQWIGIGRTRLISGDFGLAEVCEERQWLTICTGGCEVGCHDAW 694
            LK+P F  L+WIG+GRT  +SG     E+  ER WLT+C  GCE+GCHD W
Sbjct: 550  LKRPFFQALKWIGLGRT-CLSGKAN--EILNERPWLTLCLDGCEMGCHDGW 597


>ref|XP_002894512.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297340354|gb|EFH70771.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 606

 Score =  267 bits (682), Expect = 2e-69
 Identities = 128/233 (54%), Positives = 176/233 (75%), Gaps = 2/233 (0%)
 Frame = +2

Query: 2    EVKLVSCSYITSEAVRELATCSALEVLNLLGCRSVADSCLTNISCLAFLTSLDLGGADVT 181
            EVKL +C  ITSEAV++L  C  LEVL+L  C+S++DSCL ++S L  LTSL+L GADVT
Sbjct: 366  EVKLSTCPLITSEAVKKLGLCGNLEVLDLGSCKSISDSCLNSVSALRKLTSLNLAGADVT 425

Query: 182  DAGIAVLGKGNAPISFLSLRGCKRVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAI 361
            D+G+  LGK + PI+ LSLRGC+RV+D+GI+ LL NEG I+KTLS+LDLGHMPGI+D AI
Sbjct: 426  DSGMLALGKSDVPITQLSLRGCRRVSDRGISHLLNNEGTITKTLSTLDLGHMPGISDRAI 485

Query: 362  ITVTDACIGLTEMRIRNCFHVTDASVKALALKGR-FQGESKRLRRLDLYNCTALSVESFK 538
             T+T  C  LTE+ IR+CFHVTD+S+++LA + R  +G SK+LR+L+++NC +L+  + +
Sbjct: 486  HTITHCCKALTELSIRSCFHVTDSSIESLATRERQAEGGSKQLRKLNVHNCVSLTTGALR 545

Query: 539  FLKKPLFCGLQWIGIGRTRLIS-GDFGLAEVCEERQWLTICTGGCEVGCHDAW 694
            +L KP F GL W+G+G+TR     +   A +C  R WLT+C  GCE+GC+D W
Sbjct: 546  WLSKPSFAGLHWLGLGQTRFAGRKETVTATICGHRPWLTLCFDGCELGCYDGW 598


>ref|NP_175955.1| F-box protein At-B [Arabidopsis thaliana]
            gi|75339120|sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box
            protein At-B gi|8778504|gb|AAF79512.1|AC002328_20 F20N2.2
            [Arabidopsis thaliana] gi|20856547|gb|AAM26672.1|
            At1g55590/F20N2_18 [Arabidopsis thaliana]
            gi|24111385|gb|AAN46816.1| At1g55590/F20N2_18
            [Arabidopsis thaliana] gi|332195148|gb|AEE33269.1| F-box
            protein At-B [Arabidopsis thaliana]
          Length = 607

 Score =  265 bits (676), Expect = 8e-69
 Identities = 127/233 (54%), Positives = 176/233 (75%), Gaps = 2/233 (0%)
 Frame = +2

Query: 2    EVKLVSCSYITSEAVRELATCSALEVLNLLGCRSVADSCLTNISCLAFLTSLDLGGADVT 181
            EV+L +C  ITSEAV++L  C  LEVL+L  C+S++DSCL ++S L  LTSL+L GADVT
Sbjct: 367  EVRLSTCPLITSEAVKKLGLCGNLEVLDLGSCKSISDSCLNSVSALRKLTSLNLAGADVT 426

Query: 182  DAGIAVLGKGNAPISFLSLRGCKRVTDKGIALLLGNEGKISKTLSSLDLGHMPGITDNAI 361
            D+G+  LGK + PI+ LSLRGC+RV+D+GI+ LL NEG ISKTLS+LDLGHMPGI+D AI
Sbjct: 427  DSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAI 486

Query: 362  ITVTDACIGLTEMRIRNCFHVTDASVKALAL-KGRFQGESKRLRRLDLYNCTALSVESFK 538
             T+T  C  LTE+ IR+CFHVTD+S+++LA  + + +G SK+LR+L+++NC +L+  + +
Sbjct: 487  HTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVSLTTGALR 546

Query: 539  FLKKPLFCGLQWIGIGRTRLIS-GDFGLAEVCEERQWLTICTGGCEVGCHDAW 694
            +L KP F GL W+G+G+TR     +   A +C +R WLT+C  GCE+GC D W
Sbjct: 547  WLSKPSFAGLHWLGMGQTRFAGRKETVTAMICGQRPWLTLCFDGCELGCSDGW 599


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