BLASTX nr result

ID: Atractylodes22_contig00013692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013692
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-59
ref|XP_002529740.1| ribosome biogenesis protein brix, putative [...   176   2e-59
ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|2...   168   8e-58
ref|NP_001242653.1| uncharacterized protein LOC100797887 [Glycin...   170   5e-57
emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]   160   9e-56

>ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|222860575|gb|EEE98122.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  174 bits (441), Expect(2) = 1e-59
 Identities = 89/121 (73%), Positives = 100/121 (82%), Gaps = 7/121 (5%)
 Frame = +3

Query: 96  MGKKRKHAEVEV-PAAKKDETALERPKRTLLGWKDKPEPQHAVT------GFRNKEKVLV 254
           MGKKRKH+E +V   AKKDE+  ERPKRTLLGWKDKPE +   +      GFRNKEKVLV
Sbjct: 1   MGKKRKHSETQVIEPAKKDESETERPKRTLLGWKDKPEEKETESLPPHQGGFRNKEKVLV 60

Query: 255 TCSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEFTQW 434
           TCSRRINYRYRHLMLNLVS+LPHCKKD+KVES ++KGATLNELVELK+CSS LFFE  + 
Sbjct: 61  TCSRRINYRYRHLMLNLVSLLPHCKKDSKVESTSSKGATLNELVELKNCSSSLFFECRKH 120

Query: 435 K 437
           K
Sbjct: 121 K 121



 Score = 80.9 bits (198), Expect(2) = 1e-59
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +2

Query: 422 VHTMEELMLTGNHLKGSRPFLTFSSNFDKDPHWKLLKEMII 544
           VHTMEEL LTGNHLKGSRP LTFS+NFDKD HWKLLKEMII
Sbjct: 143 VHTMEELKLTGNHLKGSRPLLTFSANFDKDAHWKLLKEMII 183


>ref|XP_002529740.1| ribosome biogenesis protein brix, putative [Ricinus communis]
           gi|223530781|gb|EEF32647.1| ribosome biogenesis protein
           brix, putative [Ricinus communis]
          Length = 312

 Score =  176 bits (445), Expect(2) = 2e-59
 Identities = 90/116 (77%), Positives = 98/116 (84%), Gaps = 2/116 (1%)
 Frame = +3

Query: 96  MGKKRKHAEVEVPAA-KKDETALERPKRTLLGWKDKPEPQHAVT-GFRNKEKVLVTCSRR 269
           MGKKRKH+E EV A  KKDE+A ERPKRTLLGWKDK E +   T GFRNKEKVLVTCSRR
Sbjct: 1   MGKKRKHSETEVAAPEKKDESAAERPKRTLLGWKDKSEVKPTETQGFRNKEKVLVTCSRR 60

Query: 270 INYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEFTQWK 437
           INYRYRHLMLN+VS+LPHCKKDNKVESK++KG  LNELVELK  SSCLFFE  + K
Sbjct: 61  INYRYRHLMLNIVSLLPHCKKDNKVESKSSKGMALNELVELKGSSSCLFFECRKHK 116



 Score = 79.0 bits (193), Expect(2) = 2e-59
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +2

Query: 422 VHTMEELMLTGNHLKGSRPFLTFSSNFDKDPHWKLLKEMII 544
           VHTMEEL LTGNHLKGSRP LTFS+NFDKD HWKLLKEM++
Sbjct: 138 VHTMEELKLTGNHLKGSRPILTFSANFDKDAHWKLLKEMLM 178


>ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|222869814|gb|EEF06945.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  168 bits (426), Expect(2) = 8e-58
 Identities = 91/123 (73%), Positives = 98/123 (79%), Gaps = 9/123 (7%)
 Frame = +3

Query: 96  MGKKRKHAEVEV-PAAKKDETALERPKRTLLGWKDKPE--------PQHAVTGFRNKEKV 248
           MGKKRKH E +V   AKKDE A ERPKRTLLGWKDKPE        PQ    GFRNKEKV
Sbjct: 1   MGKKRKHVETQVIEPAKKDEGAPERPKRTLLGWKDKPEVKETEFIPPQQG--GFRNKEKV 58

Query: 249 LVTCSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEFT 428
           LVTCSRRIN+RYRHLMLNLVS+LPHCKKD+KVES +TKGATLNELVELK+ SS LFFE  
Sbjct: 59  LVTCSRRINFRYRHLMLNLVSLLPHCKKDSKVESTSTKGATLNELVELKNGSSSLFFECR 118

Query: 429 QWK 437
           + K
Sbjct: 119 KHK 121



 Score = 80.9 bits (198), Expect(2) = 8e-58
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = +2

Query: 422 VHTMEELMLTGNHLKGSRPFLTFSSNFDKDPHWKLLKEMII 544
           VHTMEEL LTGNHLKGSRP LTFS+NFDKD HWKLLKEMII
Sbjct: 143 VHTMEELKLTGNHLKGSRPLLTFSANFDKDAHWKLLKEMII 183


>ref|NP_001242653.1| uncharacterized protein LOC100797887 [Glycine max]
           gi|255641174|gb|ACU20864.1| unknown [Glycine max]
          Length = 312

 Score =  170 bits (431), Expect(2) = 5e-57
 Identities = 86/116 (74%), Positives = 95/116 (81%), Gaps = 2/116 (1%)
 Frame = +3

Query: 96  MGKKRKHAEVEVPAA--KKDETALERPKRTLLGWKDKPEPQHAVTGFRNKEKVLVTCSRR 269
           MGKKRKH+E     A  KK+E A ERP RTLLGWKDK + +     FRNKEK+LVTCSRR
Sbjct: 1   MGKKRKHSETTQAVAQPKKEEAAPERPARTLLGWKDKNQVEDDSPIFRNKEKLLVTCSRR 60

Query: 270 INYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEFTQWK 437
           INYRYRHLMLNLV++LPHCKKDNKVESK TKGATLNELVELK+CSSCLFFE  + K
Sbjct: 61  INYRYRHLMLNLVTLLPHCKKDNKVESKETKGATLNELVELKNCSSCLFFECRKHK 116



 Score = 76.3 bits (186), Expect(2) = 5e-57
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +2

Query: 422 VHTMEELMLTGNHLKGSRPFLTFSSNFDKDPHWKLLKEMII 544
           VHTMEEL LTGNHL+GSRP LTFS+NF+KD HWKLLKEM++
Sbjct: 138 VHTMEELKLTGNHLQGSRPILTFSANFEKDAHWKLLKEMLL 178


>emb|CAN61504.1| hypothetical protein VITISV_011736 [Vitis vinifera]
          Length = 316

 Score =  160 bits (404), Expect(2) = 9e-56
 Identities = 84/120 (70%), Positives = 94/120 (78%), Gaps = 6/120 (5%)
 Frame = +3

Query: 96  MGKKRKHAEVEVPAA-KKDETALERPKRTLLGWKDKP-----EPQHAVTGFRNKEKVLVT 257
           MGKKRKH+E  V    KKD  A ERPKRTLLGWKD       E + +   FRNKEKVLVT
Sbjct: 1   MGKKRKHSEANVAEPPKKDSDAPERPKRTLLGWKDPTPTETKETESSSPIFRNKEKVLVT 60

Query: 258 CSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEFTQWK 437
           CSRRI+YRYRHLML++VS+LPH KKDNKVESK +KGATLNELVELK+CSSCLFFE  + K
Sbjct: 61  CSRRISYRYRHLMLSIVSLLPHAKKDNKVESKESKGATLNELVELKNCSSCLFFECRKQK 120



 Score = 82.4 bits (202), Expect(2) = 9e-56
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +2

Query: 422 VHTMEELMLTGNHLKGSRPFLTFSSNFDKDPHWKLLKEMI 541
           VHTMEEL LTGNHLKGSRP LTFS+NFDKDPHWKLLKEMI
Sbjct: 142 VHTMEELKLTGNHLKGSRPLLTFSTNFDKDPHWKLLKEMI 181


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