BLASTX nr result

ID: Atractylodes22_contig00013554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013554
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   216   3e-54
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   211   8e-53
ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   208   7e-52
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              206   4e-51
ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycin...   204   1e-50

>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  216 bits (550), Expect = 3e-54
 Identities = 100/136 (73%), Positives = 113/136 (83%)
 Frame = -2

Query: 641 MVVRLRLARWGCSNRPFYRVTAADSRSPRDGKHIEVLGYYNPLPGQDGDKRMGLNFERVK 462
           MVVR+RL+R+GC NRPFYRV AADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 60

Query: 461 YWLSVGAQPSDPVQRLLFRAGLLPPPPMVAMGRKGGPRDTCQVDPCSGHVTMPKQPTKAG 282
           YWLSVGAQPSDPVQ++LFRAGLLPPPPMVAMGRKGG RDT  VDP +G +  P +PT   
Sbjct: 61  YWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVE 120

Query: 281 NESVEPSGNDDQENKP 234
               +  GN+D  + P
Sbjct: 121 QPKDDEDGNEDSPSTP 136


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  211 bits (538), Expect = 8e-53
 Identities = 100/122 (81%), Positives = 109/122 (89%), Gaps = 1/122 (0%)
 Frame = -2

Query: 641 MVVRLRLARWGCSNRPFYRVTAADSRSPRDGKHIEVLGYYNPLPGQDGDKRMGLNFERVK 462
           MVVR+RL+R+GC N+PFYRV AADSRSPRDGKH+E+LGYYNPLPGQDG KRMGLNFERVK
Sbjct: 1   MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVK 60

Query: 461 YWLSVGAQPSDPVQRLLFRAGLLPPPPMVAMGRKGGPRDTCQVDPCSGH-VTMPKQPTKA 285
           YWLSVGAQPSDPVQR+LFR+GLLPPPPMVAMGRKGGPRDT  VDP SG  VT  K+PT  
Sbjct: 61  YWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRFVTPAKKPTDG 120

Query: 284 GN 279
            N
Sbjct: 121 SN 122


>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  208 bits (530), Expect = 7e-52
 Identities = 98/133 (73%), Positives = 116/133 (87%)
 Frame = -2

Query: 641 MVVRLRLARWGCSNRPFYRVTAADSRSPRDGKHIEVLGYYNPLPGQDGDKRMGLNFERVK 462
           MVVRLRL+R+GC N+PFYRV AADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+R+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 60

Query: 461 YWLSVGAQPSDPVQRLLFRAGLLPPPPMVAMGRKGGPRDTCQVDPCSGHVTMPKQPTKAG 282
           YWLSVGAQPSDPVQRLLFRAG+LPPPPM+AMG+KGGPRDT  VDP +G +T P + TK+ 
Sbjct: 61  YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTP-ESTKSA 119

Query: 281 NESVEPSGNDDQE 243
             +V    ++D++
Sbjct: 120 VPTVGSEVDEDKD 132


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  206 bits (523), Expect = 4e-51
 Identities = 97/132 (73%), Positives = 111/132 (84%)
 Frame = -2

Query: 641 MVVRLRLARWGCSNRPFYRVTAADSRSPRDGKHIEVLGYYNPLPGQDGDKRMGLNFERVK 462
           MVVR+RL+R+GCSN+PFYRV AADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNFERVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 461 YWLSVGAQPSDPVQRLLFRAGLLPPPPMVAMGRKGGPRDTCQVDPCSGHVTMPKQPTKAG 282
           YWLSVGAQPS+PVQR+LFRAGLLPPPPM+ MGRKGGPRDT  VDP +G    P++   + 
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 281 NESVEPSGNDDQ 246
             +   S ND +
Sbjct: 121 QSNA--SKNDTE 130


>ref|NP_001236904.1| uncharacterized protein LOC100499851 [Glycine max]
           gi|255627125|gb|ACU13907.1| unknown [Glycine max]
          Length = 132

 Score =  204 bits (520), Expect = 1e-50
 Identities = 98/134 (73%), Positives = 111/134 (82%)
 Frame = -2

Query: 641 MVVRLRLARWGCSNRPFYRVTAADSRSPRDGKHIEVLGYYNPLPGQDGDKRMGLNFERVK 462
           MVVR+RL+R GC N+PFYRV AADSRSPRDGKH+EVLGYYNPLPGQDG KRMGLNF+RVK
Sbjct: 1   MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 60

Query: 461 YWLSVGAQPSDPVQRLLFRAGLLPPPPMVAMGRKGGPRDTCQVDPCSGHVTMPKQPTKAG 282
           YWLSVGAQPS+PV+RLLFRAG+LPPPPMVAMGRKGGPRDT  VD  +G V   ++P  A 
Sbjct: 61  YWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADAN 120

Query: 281 NESVEPSGNDDQEN 240
           N   +   +D  EN
Sbjct: 121 NTEQQ---HDTPEN 131


Top