BLASTX nr result

ID: Atractylodes22_contig00013534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013534
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666...   113   1e-23
gb|ABK94359.1| unknown [Populus trichocarpa]                          113   1e-23
ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370...   113   2e-23
ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucu...   111   5e-23
sp|P25469.1|H2A1_SOLLC RecName: Full=Histone H2A.1; AltName: Ful...   111   7e-23

>ref|XP_002330210.1| histone 2 [Populus trichocarpa] gi|222871666|gb|EEF08797.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/78 (78%), Positives = 62/78 (79%)
 Frame = -3

Query: 345 AEVLELAGNAARDNKKSRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPXX 166
           AEVLELAGNAARDNKK+RINPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLP  
Sbjct: 64  AEVLELAGNAARDNKKTRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKK 123

Query: 165 XXXXXXXXXXXXXSPKKA 112
                        SPKKA
Sbjct: 124 TSGSEKSSGSEPKSPKKA 141


>gb|ABK94359.1| unknown [Populus trichocarpa]
          Length = 145

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/78 (78%), Positives = 62/78 (79%)
 Frame = -3

Query: 345 AEVLELAGNAARDNKKSRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPXX 166
           AEVLELAGNAARDNKK+RINPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLP  
Sbjct: 68  AEVLELAGNAARDNKKTRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLPKK 127

Query: 165 XXXXXXXXXXXXXSPKKA 112
                        SPKKA
Sbjct: 128 TSGSEKSSGSEPKSPKKA 145


>ref|XP_002318994.1| histone 2 [Populus trichocarpa] gi|222857370|gb|EEE94917.1| histone
           2 [Populus trichocarpa]
          Length = 141

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/78 (76%), Positives = 62/78 (79%)
 Frame = -3

Query: 345 AEVLELAGNAARDNKKSRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPXX 166
           AEVLELAGNAARDNKK+RINPRHVLLA+RNDEELGKLL GVTIASGGVLPNINPVLLP  
Sbjct: 64  AEVLELAGNAARDNKKNRINPRHVLLAIRNDEELGKLLQGVTIASGGVLPNINPVLLPKK 123

Query: 165 XXXXXXXXXXXXXSPKKA 112
                        SPKKA
Sbjct: 124 SASSEKSSGSEPKSPKKA 141


>ref|XP_004144786.1| PREDICTED: probable histone H2A.5-like [Cucumis sativus]
           gi|449521036|ref|XP_004167537.1| PREDICTED: probable
           histone H2A.5-like [Cucumis sativus]
          Length = 141

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/58 (96%), Positives = 57/58 (98%)
 Frame = -3

Query: 345 AEVLELAGNAARDNKKSRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLP 172
           AEVLELAGNAARDNKK+RINPRHVLLAVRNDEELGKLL GVTIASGGVLPNINPVLLP
Sbjct: 63  AEVLELAGNAARDNKKNRINPRHVLLAVRNDEELGKLLQGVTIASGGVLPNINPVLLP 120


>sp|P25469.1|H2A1_SOLLC RecName: Full=Histone H2A.1; AltName: Full=LeH2A-1
           gi|355477218|gb|AES12482.1| putative histone 2A protein
           [Solanum lycopersicum]
          Length = 146

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/58 (98%), Positives = 57/58 (98%)
 Frame = -3

Query: 345 AEVLELAGNAARDNKKSRINPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLP 172
           AEVLELAGNAARDNKKSRI PRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLP
Sbjct: 67  AEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLP 124


Top