BLASTX nr result

ID: Atractylodes22_contig00013514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013514
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica...    64   1e-08
ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helica...    64   1e-08
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...    64   1e-08
ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, p...    64   1e-08
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...    64   1e-08

>ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1144

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
 Frame = +1

Query: 1    VVHRETLMSFKTMDDGQVLLYANYVNT-YDTKRFHIPDLSLGKK*R-STLYL--YVILSD 168
            VVHRET MSFKTMDDGQVLLYAN VN  Y+T  F  P L  G+K + +T++L     +SD
Sbjct: 881  VVHRETSMSFKTMDDGQVLLYANSVNARYNTIPF--PWLVFGEKVKVNTVFLRDSTGISD 938

Query: 169  SILILFGGSL 198
            S+LILFGG++
Sbjct: 939  SMLILFGGAV 948


>ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1144

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
 Frame = +1

Query: 1    VVHRETLMSFKTMDDGQVLLYANYVNT-YDTKRFHIPDLSLGKK*R-STLYL--YVILSD 168
            VVHRET MSFKTMDDGQVLLYAN VN  Y+T  F  P L  G+K + +T++L     +SD
Sbjct: 881  VVHRETSMSFKTMDDGQVLLYANSVNARYNTIPF--PWLVFGEKVKVNTVFLRDSTGISD 938

Query: 169  SILILFGGSL 198
            S+LILFGG++
Sbjct: 939  SMLILFGGAV 948


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 1    VVHRETLMSFKTMDDGQVLLYANYVNT-YDTKRFHIPDLSLGKK*RSTLYLY---VILSD 168
            VVHRET MSFKTMDDGQVLLYAN VN  Y T  +  P L  G+K +           +SD
Sbjct: 896  VVHRETSMSFKTMDDGQVLLYANSVNARYQTIPY--PWLVFGEKVKVNAVFIRDSTGVSD 953

Query: 169  SILILFGGSLVN 204
            SILILFGG+L N
Sbjct: 954  SILILFGGALSN 965


>ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, partial [Medicago
           truncatula] gi|355504187|gb|AES85390.1| ATP-dependent
           RNA helicase A-like protein, partial [Medicago
           truncatula]
          Length = 333

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/72 (58%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
 Frame = +1

Query: 1   VVHRETLMSFKTMDDGQVLLYANYVNT-YDTKRFHIPDLSLGKK*RSTLYLY---VILSD 168
           VVHRET MSFKTMDDGQVLLYAN VN  Y T  +  P L  G+K +           +SD
Sbjct: 67  VVHRETSMSFKTMDDGQVLLYANSVNARYQTIPY--PWLVFGEKVKVNAVFIRDSTGVSD 124

Query: 169 SILILFGGSLVN 204
           SILILFGG+L N
Sbjct: 125 SILILFGGALSN 136


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
 Frame = +1

Query: 1    VVHRETLMSFKTMDDGQVLLYANYVNT-YDTKRFHIPDLSLGKK*R-STLYL--YVILSD 168
            VVHRET MSFKTMDDGQVLLYAN VN  Y T  +  P L  G+K + +T+++     +SD
Sbjct: 865  VVHRETSMSFKTMDDGQVLLYANSVNARYQTIPY--PWLVFGEKVKVNTVFIRDSTGVSD 922

Query: 169  SILILFGGSL 198
            SILILFGG+L
Sbjct: 923  SILILFGGAL 932


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