BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013476
         (1034 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      396   e-108
ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   383   e-104
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   380   e-103
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      371   e-100

>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  396 bits (1018), Expect = e-108
 Identities = 204/344 (59%), Positives = 254/344 (73%)
 Frame = -1

Query: 1034 SLLEKQWXXXXXXXXXXXXXTERNSRRVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGE 855
            S+LEKQW              E+ S+++H+T SG SARRRR+D++     R+SS      
Sbjct: 117  SMLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSA 176

Query: 854  NKQLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLG 675
             K LRSII PELLQN  +GY+KGV +E LLTH+EV  LSKKI++GL+           LG
Sbjct: 177  AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLG 236

Query: 674  SEPSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXX 495
             EPS+ QLA SL++S  DLQ+  IEC+LA+E+LA+SNVRLVMS+AQ+Y ++GA+M+D   
Sbjct: 237  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296

Query: 494  XXXXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTA 315
                     IEK+DPS+G+KISTYVYWWIRQGV+R   ENS+TLRLPT+LHERLS IR A
Sbjct: 297  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNA 356

Query: 314  KAKLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFI 135
            KA+LE KGITPS++ IA SL MS+KKV NATEA  K++S+D+EAFPSLNGLPGE LHS+I
Sbjct: 357  KARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYI 416

Query: 134  ADDSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGL 3
            AD+  +NNPWHGVD  ALKDEV  LI+ TL +REREII LYYGL
Sbjct: 417  ADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGL 460


>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  384 bits (986), Expect = e-104
 Identities = 195/344 (56%), Positives = 253/344 (73%)
 Frame = -1

Query: 1034 SLLEKQWXXXXXXXXXXXXXTERNSRRVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGE 855
            S+LEKQW             +++N++++ VT SG+SAR+RR++ +     ++  ++Q  +
Sbjct: 118  SMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSD 177

Query: 854  NKQLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLG 675
             K LRS+ SP+LLQN  +GY+KGV ++ +L H+EV  LS+ I+ GL            LG
Sbjct: 178  FKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLG 237

Query: 674  SEPSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXX 495
             EPS+ Q+A SLRIS  DLQ+K I+C+LA+EKLA+SNVRLVMS+AQKY +MGA+M+D   
Sbjct: 238  CEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQ 297

Query: 494  XXXXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTA 315
                     IEK+D S+G KISTYVYWWIRQGV+R   +NS+TLRLP HLHERL  IR A
Sbjct: 298  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNA 357

Query: 314  KAKLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFI 135
            K +LE KG+TPSID+IAESL MS++KV NATEA+ KVFS+D+EAFPSLNGLPGE  HS+I
Sbjct: 358  KIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYI 417

Query: 134  ADDSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGL 3
            AD+ P+NNPWHGVDE ALK+EV KLI  TL ERE+EII LY+GL
Sbjct: 418  ADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGL 461


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  383 bits (983), Expect = e-104
 Identities = 197/344 (57%), Positives = 251/344 (72%)
 Frame = -1

Query: 1034 SLLEKQWXXXXXXXXXXXXXTERNSRRVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGE 855
            S+LEKQW             + ++ +++ VT SG+SAR+RRI+ +    +++    Q   
Sbjct: 117  SMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANV 176

Query: 854  NKQLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLG 675
             KQL+S +SPELLQN  +GY+KGV +E LL+H+EV  LS+ IK GL            LG
Sbjct: 177  FKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLG 236

Query: 674  SEPSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXX 495
             +PS+ Q+ATSL+IS  +LQ+K I C+LA+EKLA+SNVRLVMS+AQ+Y +MGA+M+D   
Sbjct: 237  CDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 296

Query: 494  XXXXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTA 315
                     IEK+D S+G +ISTYVYWWIRQGV+R   ENS+TLRLP HLHERL  IR A
Sbjct: 297  GGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNA 356

Query: 314  KAKLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFI 135
            K +LE KG+TPSID+IAESL +S+KKV NATEAV KVFS+D+EAFPSLNGLPGE  HS+I
Sbjct: 357  KIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYI 416

Query: 134  ADDSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGL 3
            AD+  +NNPWHGVD+ ALKDEV KLI +TL ERE+EII LYYGL
Sbjct: 417  ADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGL 460


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
            gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
            polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  380 bits (976), Expect = e-103
 Identities = 198/344 (57%), Positives = 250/344 (72%)
 Frame = -1

Query: 1034 SLLEKQWXXXXXXXXXXXXXTERNSRRVHVTGSGISARRRRIDAQNNTPTRNSSVNQVGE 855
            S+LEKQW              E+  ++V VT SG+SAR+RR+ ++    +++  + Q   
Sbjct: 117  SMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKI 176

Query: 854  NKQLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXLG 675
            +KQLR  ISPELLQN  +GY+KG+ +E LL+H+EV  LSKKIK+GL            LG
Sbjct: 177  SKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLTLEERKTRLKQRLG 236

Query: 674  SEPSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXXX 495
             EPSE QLA SL+IS  +L+++ +E +LA+EKLA+SNVRLVMS+AQ+Y +MGA+M+D   
Sbjct: 237  CEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQ 296

Query: 494  XXXXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRTA 315
                     IEK+D S+G KISTYVYWWIRQGV+R   ENS+TLRLPTHLHERL  IR A
Sbjct: 297  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 356

Query: 314  KAKLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSFI 135
            K KL+ KGITPS+D+IAESL MS+KKV NATEA+ KVFS+D+EAFPSLNGLPGE  HS+I
Sbjct: 357  KVKLQEKGITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYI 416

Query: 134  ADDSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGL 3
            AD+  +NNPWHG D   LK EV +LI MTLG+REREII LY+GL
Sbjct: 417  ADNCLENNPWHGTDTWILKVEVNQLINMTLGDREREIIRLYHGL 460


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  371 bits (953), Expect = e-100
 Identities = 200/345 (57%), Positives = 240/345 (69%), Gaps = 1/345 (0%)
 Frame = -1

Query: 1034 SLLEKQWXXXXXXXXXXXXXTERN-SRRVHVTGSGISARRRRIDAQNNTPTRNSSVNQVG 858
            S+LEKQW              E N  +++ +T SG SARRRR+D +       +S     
Sbjct: 114  SMLEKQWNLSAEKAMTN----ENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDS 169

Query: 857  ENKQLRSIISPELLQNCQRGYLKGVKNEALLTHSEVAALSKKIKIGLHXXXXXXXXXXXL 678
             +K+LRS+I PELLQN  +GY+ GV  + LLTH+EV  LSKKIK GL+           L
Sbjct: 170  SSKRLRSVIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERL 229

Query: 677  GSEPSERQLATSLRISPVDLQTKQIECTLAKEKLALSNVRLVMSVAQKYRHMGADMSDXX 498
            G EPS+ QLA SL+IS  DL++  IEC+LA+EKLA+SNVRLVMS+AQ+Y   G +M+D  
Sbjct: 230  GCEPSDDQLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLI 289

Query: 497  XXXXXXXXXXIEKYDPSRGHKISTYVYWWIRQGVTRTFFENSKTLRLPTHLHERLSAIRT 318
                      IEK+D SRG KISTYVYWWIRQGV+R   ENS+TLRLP HLHERLS IR 
Sbjct: 290  QGGLIGLLRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRN 349

Query: 317  AKAKLERKGITPSIDKIAESLKMSRKKVTNATEAVHKVFSIDKEAFPSLNGLPGEKLHSF 138
            AK KL+  GITPSI+KIAE L MS+KKV NATEA  KVFS+D+EAFPSLNGLPGE LHS+
Sbjct: 350  AKIKLKENGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSY 409

Query: 137  IADDSPDNNPWHGVDEGALKDEVRKLITMTLGEREREIIHLYYGL 3
            IAD+  +N PWHGVDE  LKDEV  LI+ TL EREREI+ LYYGL
Sbjct: 410  IADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGL 454