BLASTX nr result

ID: Atractylodes22_contig00013470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013470
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   253   3e-65
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   235   8e-60
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   235   1e-59
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   229   5e-58

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  253 bits (647), Expect = 3e-65
 Identities = 146/287 (50%), Positives = 191/287 (66%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3   VSDIDRWILFLSRGSLKEFILRV-SDSYYQLPSSFYLCDKLSHLELFYCRLEPPSAFNGF 179
           VSDIDRWIL LSR S+KEFIL +     Y++PSS +  + L HLELF C L+PP  F GF
Sbjct: 107 VSDIDRWILHLSRSSIKEFILEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGF 166

Query: 180 KILTSLVLCDILMDQNLLENLIYMCPLLERLTLRHIHILDHLKIHAPRLAFFEFESFSED 359
           + L SL L  I + QN+ ENLI+ CPLLERLTL +     HL I+AP L FF+     +D
Sbjct: 167 RSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDD 226

Query: 360 VTFENTVHLSNVSISIGGKV-NDHNLPFRNMSTLIKFFASLPNIQRLNVNNYVLEILAGD 536
           VTFENT  L+ VSI +   V ND N+   + S L++FFA+LP+I+RL V +Y L+ L+  
Sbjct: 227 VTFENTFQLTLVSIGLYVNVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYLSIG 286

Query: 537 TVPRRLPTPCMKLNYLSLPINFDDMEQCLAALCILRSSPNLMELKIVSCKPYPYEPPAPR 716
            VP RLP PC  LNYLS+ INF+D+E+  AALC+LRSSPN+ EL++++    P E  +  
Sbjct: 287 NVPSRLPKPCFDLNYLSIRINFNDLEENSAALCLLRSSPNVQELEMLA---RPEEQTSLG 343

Query: 717 EVTKNLMELEDYQNNCFFNQLRFVVITGIYEVPRELNFIEFLLANSP 857
            +T N  E +D+ NN  F QLR V I GI  +  EL+F+ FLL+NSP
Sbjct: 344 TIT-NFWE-DDHWNN-LFGQLRLVRIVGISGIRCELDFMNFLLSNSP 387


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  241 bits (614), Expect = 2e-61
 Identities = 135/287 (47%), Positives = 180/287 (62%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3   VSDIDRWILFLSRGSLKEFILRV-SDSYYQLPSSFYLCDKLSHLELFYCRLEPPSAFNGF 179
           VSDIDRWIL LSRGS KEF+L +     Y+LPS  +  + L+HLELF C L+PP AF GF
Sbjct: 97  VSDIDRWILHLSRGSTKEFVLEIWKGQRYKLPSCLFSFENLTHLELFNCLLKPPPAFKGF 156

Query: 180 KILTSLVLCDILMDQNLLENLIYMCPLLERLTLRHIHILDHLKIHAPRLAFFEFESFSED 359
           + L SL L  + + Q + ENLI  C LLERLTL +     HLKI+AP L FF+     +D
Sbjct: 157 RNLKSLDLQHVTLAQEVFENLISSCALLERLTLMNFDGFTHLKINAPNLQFFDIGGIFDD 216

Query: 360 VTFENTVHLSNVSISIGGKV-NDHNLPFRNMSTLIKFFASLPNIQRLNVNNYVLEILAGD 536
           V+F NT  L+ VSI +   V ND ++   + S L++FF +LP+++RL + +Y ++ LA  
Sbjct: 217 VSFHNTSLLTLVSIGLYANVKNDRHVSRGSSSKLLRFFVNLPHLRRLEIQSYFIKYLAIS 276

Query: 537 TVPRRLPTPCMKLNYLSLPINFDDMEQCLAALCILRSSPNLMELKIVSCKPYPYEPPAPR 716
            VP RLP PCM LNY+S+ INF+D E+  AALCIL+S PNL E++++        P    
Sbjct: 277 KVPSRLPKPCMDLNYISIRINFNDFEENSAALCILKSCPNLQEIEMLG------RPEEQA 330

Query: 717 EVTKNLMELEDYQNNCFFNQLRFVVITGIYEVPRELNFIEFLLANSP 857
           +V        D Q  C F QLR V I GI  +  EL+ I+FLL+NSP
Sbjct: 331 DVEPQTGFWGDDQWKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSP 377


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  235 bits (600), Expect = 8e-60
 Identities = 138/286 (48%), Positives = 176/286 (61%), Gaps = 2/286 (0%)
 Frame = +3

Query: 6   SDIDRWILFLSRGSLKEFILRV-SDSYYQLPSSFYLCDKLSHLELFYCRLEPPSAFNGFK 182
           SDIDRWIL+LSR  ++EFIL +    +Y+LPS  Y C  L HLELF   L+PP  F GF 
Sbjct: 98  SDIDRWILYLSRTPIREFILEIWKGQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFX 157

Query: 183 ILTSLVLCDILMDQNLLENLIYMCPLLERLTLRHIHILDHLKIHAPRLAFFEFESFSEDV 362
            L SL L  I+M Q+  ENLI  CPLLE+ TL +     HL IHAP L FF+      DV
Sbjct: 158 SLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDV 217

Query: 363 TFENTVHLSNVSISIGGKV-NDHNLPFRNMSTLIKFFASLPNIQRLNVNNYVLEILAGDT 539
            F+NT  L+ VSI +   + ND NL   N   L+KFFA LP IQRL + +Y L+ LA   
Sbjct: 218 NFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGN 277

Query: 540 VPRRLPTPCMKLNYLSLPINFDDMEQCLAALCILRSSPNLMELKIVSCKPYPYEPPAPRE 719
           VP +LP PC+ L +LS+ INF  +E+ L ALC+LRSSPNL EL++++ +P   E     E
Sbjct: 278 VPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLA-RP---EEQTLLE 333

Query: 720 VTKNLMELEDYQNNCFFNQLRFVVITGIYEVPRELNFIEFLLANSP 857
            +  L + E +  N  F  LR V +TGI  V  +L+FI FLLA SP
Sbjct: 334 TSTTLWKKEHW--NYXFAHLRVVKLTGISGVGPQLDFINFLLAYSP 377


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score =  235 bits (599), Expect = 1e-59
 Identities = 138/286 (48%), Positives = 176/286 (61%), Gaps = 2/286 (0%)
 Frame = +3

Query: 6   SDIDRWILFLSRGSLKEFILRV-SDSYYQLPSSFYLCDKLSHLELFYCRLEPPSAFNGFK 182
           SDIDRWIL+LSR  ++EFIL +    +Y+LPS  Y C  L HLELF   L+PP  F GF 
Sbjct: 98  SDIDRWILYLSRTPIREFILEIWKGQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFM 157

Query: 183 ILTSLVLCDILMDQNLLENLIYMCPLLERLTLRHIHILDHLKIHAPRLAFFEFESFSEDV 362
            L SL L  I+M Q+  ENLI  CPLLE+ TL +     HL IHAP L FF+      DV
Sbjct: 158 SLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGGVFYDV 217

Query: 363 TFENTVHLSNVSISIGGKV-NDHNLPFRNMSTLIKFFASLPNIQRLNVNNYVLEILAGDT 539
            F+NT  L+ VSI +   + ND NL   N   L+KFFA LP IQRL + +Y L+ LA   
Sbjct: 218 NFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGN 277

Query: 540 VPRRLPTPCMKLNYLSLPINFDDMEQCLAALCILRSSPNLMELKIVSCKPYPYEPPAPRE 719
           VP +LP PC+ L +LS+ INF  +E+ L ALC+LRSSPNL EL++++ +P   E     E
Sbjct: 278 VPGKLPAPCIDLTHLSIRINFSSVEENLTALCLLRSSPNLQELEMLA-RP---EEQTLLE 333

Query: 720 VTKNLMELEDYQNNCFFNQLRFVVITGIYEVPRELNFIEFLLANSP 857
            +  L + E +  N  F  LR V +TGI  V  +L+FI FLLA SP
Sbjct: 334 TSTTLWKKEHW--NYSFAHLRVVKLTGISGVGPQLDFINFLLAYSP 377


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
            predicted protein [Populus trichocarpa]
          Length = 505

 Score =  229 bits (585), Expect = 5e-58
 Identities = 132/287 (45%), Positives = 179/287 (62%), Gaps = 2/287 (0%)
 Frame = +3

Query: 3    VSDIDRWILFLSRGSLKEFILRV-SDSYYQLPSSFYLCDKLSHLELFYCRLEPPSAFNGF 179
            VSDIDRWIL LSRGS KEF+L +     Y+LPS  +    L +LELF C L+PP AF GF
Sbjct: 186  VSDIDRWILHLSRGSTKEFVLEIWKGQQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGF 245

Query: 180  KILTSLVLCDILMDQNLLENLIYMCPLLERLTLRHIHILDHLKIHAPRLAFFEFESFSED 359
            + L +L L  + + Q + E LI  C +LERLTL +     HL I+AP L FF+     +D
Sbjct: 246  RNLKNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGFTHLNINAPNLQFFDVGGVFDD 305

Query: 360  VTFENTVHLSNVSISIGGKV-NDHNLPFRNMSTLIKFFASLPNIQRLNVNNYVLEILAGD 536
            V+FENT  L+ VSI +   V ND N+ + + S L++FF +LP+++RL + +Y L+ LA  
Sbjct: 306  VSFENTFVLALVSIGLYVNVKNDQNVSYGSSSKLLRFFVNLPHVRRLEIQSYFLKYLAIG 365

Query: 537  TVPRRLPTPCMKLNYLSLPINFDDMEQCLAALCILRSSPNLMELKIVSCKPYPYEPPAPR 716
             VP +LP PC+ LNYLS+ +NF+D E+  AA C+LRS PNL E++I++    P E     
Sbjct: 366  KVPSKLPKPCIDLNYLSIRLNFNDYEENSAAFCLLRSCPNLQEIEILA---RPEEQAVVG 422

Query: 717  EVTKNLMELEDYQNNCFFNQLRFVVITGIYEVPRELNFIEFLLANSP 857
             VT      +D    C F QLR V I GI  +  EL+ I+FLL+NSP
Sbjct: 423  PVTD---FWDDDHWKCLFGQLRLVKIVGISGIRSELDCIKFLLSNSP 466


Top