BLASTX nr result

ID: Atractylodes22_contig00013453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013453
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab...   131   2e-28
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   129   6e-28
ref|XP_004145558.1| PREDICTED: RING-H2 finger protein ATL80-like...   129   7e-28
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   129   7e-28

>ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|222843629|gb|EEE81176.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  134 bits (338), Expect = 2e-29
 Identities = 74/166 (44%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = +3

Query: 48  MSRRFRMLAGQNSTTTAVTEAPPDPD-NVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXX 224
           M+R F  L    +++   T +PP     VDSDF                     RC W  
Sbjct: 1   MARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLR 60

Query: 225 XXXXXXXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDE 404
                         PP+ AN              T+S E  + K  DCAICLTEF A DE
Sbjct: 61  RFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFS-EDFSGKLPDCAICLTEFSAGDE 119

Query: 405 IRVLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELP 542
           IRVLP+CGHGFHV+CIDTW GSHSSCPSCRQILV A RC+KCG LP
Sbjct: 120 IRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVA-RCQKCGGLP 164


>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
           lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
           ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  131 bits (330), Expect = 2e-28
 Identities = 76/162 (46%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = +3

Query: 60  FRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXXXXXX 239
           FR+L   NST+    EAPP     +SD                      RC W       
Sbjct: 6   FRLLQETNSTSPP--EAPPP---FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 240 XXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETM-AEKFSDCAICLTEFVADDEIRVL 416
                T   P AAAN              TYS ++  AEK  +CAICLTEF A DE+RVL
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 417 PRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELP 542
           P+CGHGFHV+CIDTW GSHSSCPSCRQILV A RC KCG LP
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVA-RCHKCGGLP 161


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  129 bits (325), Expect = 6e-28
 Identities = 78/191 (40%), Positives = 89/191 (46%)
 Frame = +3

Query: 48  MSRRFRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXX 227
           M+   R L G NS+ TA  E+      VDSDF                     RC W   
Sbjct: 1   MTHPSRFLGGVNSSATASQESAA----VDSDFVVILAALLCALICVLGLVAVARCAWLRR 56

Query: 228 XXXXXXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDEI 407
                       +P   AN              TY+ ET A   +DCAICLTEFV  DEI
Sbjct: 57  ISGAANLPG-GSAPQTPANKGLKKKILRSLPKVTYAAET-AGNLTDCAICLTEFVGGDEI 114

Query: 408 RVLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPXXXXXXXXXXXXXXX 587
           RVLP+CGHGFHV CIDTW GSH SCPSCRQILV A RC+KCG +P               
Sbjct: 115 RVLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVA-RCQKCGGVPASSSSTGAETESRLK 173

Query: 588 XXSASIDRFLP 620
                ++RFLP
Sbjct: 174 EREDDVNRFLP 184


>ref|XP_004145558.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
           gi|449530265|ref|XP_004172116.1| PREDICTED: RING-H2
           finger protein ATL80-like [Cucumis sativus]
          Length = 185

 Score =  129 bits (324), Expect = 7e-28
 Identities = 77/190 (40%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
 Frame = +3

Query: 54  RRFRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXXXX 233
           R FR LAG NS+ T+ T  P      DSDF                     RC W     
Sbjct: 2   RPFRYLAGVNSSATSDTFEP----RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLA 57

Query: 234 XXXXXXX-TDQSPPAAANXXXXXXXXXXXXXXTYSTETMAEKFSDCAICLTEFVADDEIR 410
                   T   PP A+N              T++ E  A+ FSDCAICL EF   DEIR
Sbjct: 58  GDGGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQ-FSDCAICLAEFAVGDEIR 116

Query: 411 VLPRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELPXXXXXXXXXXXXXXXX 590
           VLP+CGHGFH++CIDTWF SHSSCPSCRQILV + +C+KCG  P                
Sbjct: 117 VLPQCGHGFHMSCIDTWFRSHSSCPSCRQILVVS-QCQKCGGFPASSSSNGGTESRVKEE 175

Query: 591 XSASIDRFLP 620
                +RFLP
Sbjct: 176 GDDKTNRFLP 185


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  129 bits (324), Expect = 7e-28
 Identities = 73/162 (45%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
 Frame = +3

Query: 60  FRMLAGQNSTTTAVTEAPPDPDNVDSDFXXXXXXXXXXXXXXXXXXXXXRCTWXXXXXXX 239
           FR+L   NST+ A    P      +SD                      RC W       
Sbjct: 6   FRLLQEANSTSPAEASPP-----FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASR 60

Query: 240 XXXXXTDQSPPAAANXXXXXXXXXXXXXXTYSTETM-AEKFSDCAICLTEFVADDEIRVL 416
                T   P AAAN              TYS ++  AEK  +CAICLTEF A DE+RVL
Sbjct: 61  NRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVL 120

Query: 417 PRCGHGFHVTCIDTWFGSHSSCPSCRQILVAAPRCKKCGELP 542
           P+CGHGFHV+CIDTW GSHSSCPSCRQILV   RC KCG LP
Sbjct: 121 PQCGHGFHVSCIDTWLGSHSSCPSCRQILVVT-RCHKCGGLP 161


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