BLASTX nr result

ID: Atractylodes22_contig00013387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013387
         (794 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...   147   2e-33
ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   145   8e-33
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   145   1e-32
ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002885945.1| SWIB complex BAF60b domain-containing protei...   135   1e-29

>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score =  147 bits (372), Expect = 2e-33
 Identities = 82/147 (55%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
 Frame = +3

Query: 72  MAMPLGFFSTLSAAGTPSLAKP-PSSSLMLVHPAFFQPSHARLRTLVTYATASKPATETE 248
           MA+  G  S++ +  T S  KP PSSS++LV P    PS A LR +V   T     +  +
Sbjct: 1   MAITSGILSSVLSPQTVSFLKPYPSSSMLLVAP----PSSANLR-MVRTVTCCATVSSQQ 55

Query: 249 TKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIICDE 428
            ++R PRG  KPR VSPEM + +G  +EIPRT+ LK IWA+IKE  LQDP NKK+IICDE
Sbjct: 56  QEQRRPRGIMKPRRVSPEMAELVGA-SEIPRTQALKRIWAHIKENNLQDPENKKIIICDE 114

Query: 429 KLKKIFGDRDQIMFLEIAGLISPHFLK 509
           KLKKIFG RD++ FLE+AGLISPHFLK
Sbjct: 115 KLKKIFGGRDRVGFLEVAGLISPHFLK 141


>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  145 bits (367), Expect = 8e-33
 Identities = 83/147 (56%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = +3

Query: 72  MAMPLGFFSTLSAAGTPSLAKPPSSSLMLVH-PAFFQPSHARLRTLVTYATASKPATETE 248
           MAM LG  ST  +  T S +K   S   L H P     ++ RL   VT A ASKP     
Sbjct: 1   MAMSLGVISTFFSGETASFSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAAA- 59

Query: 249 TKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIICDE 428
           T KR PRG  KPR +SPEM+DFLG   EIPRT+ LK IWAYIK+  LQDP NKK+I+CDE
Sbjct: 60  TGKREPRGIMKPRRISPEMQDFLGV-PEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDE 118

Query: 429 KLKKIFGDRDQIMFLEIAGLISPHFLK 509
           KLK IF  +D++ FLEIAGLI+PHFLK
Sbjct: 119 KLKSIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  145 bits (366), Expect = 1e-32
 Identities = 83/147 (56%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
 Frame = +3

Query: 72  MAMPLGFFSTLSAAGTPSLAKPPSSSLMLVH-PAFFQPSHARLRTLVTYATASKPATETE 248
           MAM LG  ST  +  T S +K   S   L H P     ++ RL   VT A ASKP     
Sbjct: 1   MAMSLGVXSTFFSGETASFSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAAA- 59

Query: 249 TKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIICDE 428
           T KR PRG  KPR +SPEM+DFLG   EIPRT+ LK IWAYIK+  LQDP NKK+I+CDE
Sbjct: 60  TGKREPRGIMKPRRISPEMQDFLGV-PEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDE 118

Query: 429 KLKKIFGDRDQIMFLEIAGLISPHFLK 509
           KLK IF  +D++ FLEIAGLI+PHFLK
Sbjct: 119 KLKSIFAGKDRVGFLEIAGLINPHFLK 145


>ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|222849570|gb|EEE87117.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  141 bits (355), Expect = 2e-31
 Identities = 84/149 (56%), Positives = 99/149 (66%), Gaps = 3/149 (2%)
 Frame = +3

Query: 72  MAMPLGFFST-LSAAGTPSLAKPPSSSLMLVHPAFFQPSHARL--RTLVTYATASKPATE 242
           MA+  G FST LS    P L  P  +S + +      P++ R+   T+VT ATAS     
Sbjct: 1   MAISSGIFSTFLSTETVPLLKFPSPTSTLPLRFLAAPPANPRMVRSTVVTCATAS----- 55

Query: 243 TETKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIIC 422
             T  RAPRG  KPR VSPEM DF+G   E+ RT+ LK+IWA+IKE  LQDP+NKK IIC
Sbjct: 56  --TGNRAPRGIMKPRRVSPEMADFIGA-PEVSRTQALKLIWAHIKEHNLQDPSNKKNIIC 112

Query: 423 DEKLKKIFGDRDQIMFLEIAGLISPHFLK 509
           DEKLKKIF  RDQ+ FLEIAGLISPHFLK
Sbjct: 113 DEKLKKIFAGRDQVGFLEIAGLISPHFLK 141


>ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331785|gb|EFH62204.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 141

 Score =  135 bits (340), Expect = 1e-29
 Identities = 82/148 (55%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
 Frame = +3

Query: 72  MAMPLGFFSTLSAAGTPSL---AKPPSSSLMLVHPAFFQPSHARLRTLVTYATASKPATE 242
           MA+  G FST     T S    + PPSS  +  HPA    +  RL   VT ATAS  +  
Sbjct: 1   MAVSSGTFSTFLCVKTTSFHNQSTPPSSLRLASHPA----AKLRLVRAVTSATAS--SEP 54

Query: 243 TETKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIIC 422
           T T KR PRG  KPRPVSPEM+D +    EI RT+ LK IWAYIKE  LQDP NK+ I+C
Sbjct: 55  TATNKRVPRGIMKPRPVSPEMQDIVE-LPEIARTQALKRIWAYIKEHDLQDPQNKREILC 113

Query: 423 DEKLKKIFGDRDQIMFLEIAGLISPHFL 506
           DEKLKKIF  RD++ FLEIA LI PHFL
Sbjct: 114 DEKLKKIFEGRDRVGFLEIAKLIGPHFL 141


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