BLASTX nr result

ID: Atractylodes22_contig00013378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013378
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]          176   7e-42
ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloro...   176   9e-42
ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloro...   171   2e-40
ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana...   171   3e-40
ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arab...   170   4e-40

>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
          Length = 178

 Score =  176 bits (446), Expect = 7e-42
 Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 8/142 (5%)
 Frame = -2

Query: 864 PKTFLTSSNITHKSSFNGIRIAQVLPSPAVRTTTTRQS--------VVMMAKKEEELKEI 709
           PK  L++S+   KS+F+GIRI+ + P+         ++        VVMMAK+EEELKEI
Sbjct: 16  PKPILSASS---KSTFHGIRISHLCPARTALCARYVRNPSFFFFSLVVMMAKREEELKEI 72

Query: 708 RAKTTEEINDEIVDLKGELFMLRLQRSARNEFMSSEFRRMRKRVARMLTVKREREIEDGI 529
           R KTTEEIN+EIVDLKGELFMLRLQ+SARNEF SSEFRRMRKR+ARMLTVKREREIE+GI
Sbjct: 73  RTKTTEEINEEIVDLKGELFMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGI 132

Query: 528 GVRQSRKLDRQWRKSIVPRPPP 463
             R SRKLDRQW+KSIV RPPP
Sbjct: 133 NKRLSRKLDRQWKKSIVVRPPP 154


>ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Vitis
           vinifera]
          Length = 161

 Score =  176 bits (445), Expect = 9e-42
 Identities = 93/122 (76%), Positives = 103/122 (84%)
 Frame = -2

Query: 828 KSSFNGIRIAQVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEINDEIVDLKGELF 649
           KSSFNGIRI      P+ R+ ++  SVVMMAK+EEELKEIRAKTTEE+N+EIVDLKGEL 
Sbjct: 24  KSSFNGIRIPTP-NKPSFRSPSSSSSVVMMAKREEELKEIRAKTTEELNEEIVDLKGELL 82

Query: 648 MLRLQRSARNEFMSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKLDRQWRKSIVPRP 469
           MLRLQ+S RNEF  SEF RMRKRVARMLTVKREREIE+GI  R SRKLDRQW+KSIV RP
Sbjct: 83  MLRLQKSVRNEFKPSEFGRMRKRVARMLTVKREREIEEGINKRLSRKLDRQWKKSIVVRP 142

Query: 468 PP 463
           PP
Sbjct: 143 PP 144


>ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Cucumis
           sativus] gi|449508367|ref|XP_004163294.1| PREDICTED: 50S
           ribosomal protein L29, chloroplastic-like [Cucumis
           sativus]
          Length = 170

 Score =  171 bits (434), Expect = 2e-40
 Identities = 90/139 (64%), Positives = 109/139 (78%), Gaps = 5/139 (3%)
 Frame = -2

Query: 864 PKTFLTSSNITHKSSFNGIRIA-----QVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAK 700
           P  FL S   T KSSFN ++I      ++ P  A        SVVMMAK+E+ELK+IR+K
Sbjct: 16  PSKFLNS---TSKSSFNALQIRFPFSFRLPPKTATTGRGRNSSVVMMAKREDELKDIRSK 72

Query: 699 TTEEINDEIVDLKGELFMLRLQRSARNEFMSSEFRRMRKRVARMLTVKREREIEDGIGVR 520
           TTEEIN+E++DLKGEL MLRLQ+SARNEF SSEFRRMRKR++RMLTV+REREIE+G+G R
Sbjct: 73  TTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTVRREREIEEGVGKR 132

Query: 519 QSRKLDRQWRKSIVPRPPP 463
            SRKLDR+W+KSIV RPPP
Sbjct: 133 LSRKLDRKWKKSIVVRPPP 151


>ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana]
           gi|46397023|sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S
           ribosomal protein L29, chloroplastic; AltName:
           Full=CL29; Flags: Precursor gi|189096148|pdb|3BBO|Z
           Chain Z, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|10178184|dbj|BAB11658.1| 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|15028327|gb|AAK76640.1| putative 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|19310703|gb|AAL85082.1| putative 50S ribosomal
           protein L29 [Arabidopsis thaliana]
           gi|21553790|gb|AAM62883.1| 50S ribosomal protein L29
           [Arabidopsis thaliana] gi|222424203|dbj|BAH20060.1|
           AT5G65220 [Arabidopsis thaliana]
           gi|332010642|gb|AED98025.1| 50S ribosomal protein L29
           [Arabidopsis thaliana]
          Length = 173

 Score =  171 bits (432), Expect = 3e-40
 Identities = 87/134 (64%), Positives = 112/134 (83%), Gaps = 5/134 (3%)
 Frame = -2

Query: 849 TSSNITHKSSFNGIRI-----AQVLPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEI 685
           T+S  +  SSF+G+RI     A+V  +  + +++ + SVVMM+K+E ELKEIR+KTTE++
Sbjct: 19  TASATSTSSSFHGVRIQHQVSARVPAAATISSSSPKPSVVMMSKREAELKEIRSKTTEQL 78

Query: 684 NDEIVDLKGELFMLRLQRSARNEFMSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKL 505
            +E+VDLKGELFMLRLQ+SARNEF SS+FRRM+K+VARMLTVKREREI++GI  R SRKL
Sbjct: 79  QEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTVKREREIKEGIKKRLSRKL 138

Query: 504 DRQWRKSIVPRPPP 463
           DRQW+KSIVPRPPP
Sbjct: 139 DRQWKKSIVPRPPP 152


>ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arabidopsis lyrata subsp.
           lyrata] gi|297310782|gb|EFH41206.1| hypothetical protein
           ARALYDRAFT_919853 [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  170 bits (431), Expect = 4e-40
 Identities = 89/133 (66%), Positives = 112/133 (84%), Gaps = 4/133 (3%)
 Frame = -2

Query: 849 TSSNITHKSSFNGIRIA-QV---LPSPAVRTTTTRQSVVMMAKKEEELKEIRAKTTEEIN 682
           T S  +  SSF+G+RI  QV   +P+ A  +++ + SVVMM+K+E ELKEIR+KTTE++ 
Sbjct: 19  TDSATSTSSSFHGVRIQPQVSARVPAAATISSSRKPSVVMMSKREAELKEIRSKTTEQLQ 78

Query: 681 DEIVDLKGELFMLRLQRSARNEFMSSEFRRMRKRVARMLTVKREREIEDGIGVRQSRKLD 502
           +E+VDLKGELFMLRLQ+SARNEF SS+FRRM+K+VARMLTVKREREI++GI  R SRKLD
Sbjct: 79  EEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTVKREREIKEGIKKRLSRKLD 138

Query: 501 RQWRKSIVPRPPP 463
           RQW+KSIVPRPPP
Sbjct: 139 RQWKKSIVPRPPP 151


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