BLASTX nr result

ID: Atractylodes22_contig00013353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013353
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   231   1e-58
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   226   4e-57
ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycin...   224   1e-56
ref|XP_002533227.1| translation initiation factor if-3, putative...   222   5e-56
ref|XP_003519163.1| PREDICTED: translation initiation factor IF-...   222   6e-56

>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  231 bits (589), Expect = 1e-58
 Identities = 132/225 (58%), Positives = 155/225 (68%), Gaps = 7/225 (3%)
 Frame = -1

Query: 656 VTTSCIVPPFKHPIFVSSLQSKFSSLRLQFPNLY----VTCCYR---ITCRYGGGGNSRQ 498
           VT +       + + +SSL SK   LRL  PNL     + C       T R+GG    R 
Sbjct: 16  VTRTTTTKTTHYALCLSSLDSKLFGLRLHNPNLSKPDSLPCSSPSPVTTARFGG---PRS 72

Query: 497 EDSRRPQQTSFDADPALDVSTIRSNIVRLIDDQQNMVGIVSKSAAIQMAEDAELDLVILS 318
            DSRRP+++  D D AL++S+IRS  VRLID QQNMVG+V+   AIQMAED EL+LVI+S
Sbjct: 73  YDSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDTELNLVIVS 132

Query: 317 PDADPPVVKLMDYNXXXXXXXXXXXXXXXKSAALRMDQKELKMGYNIDVHDYSVRLRAAQ 138
           PDADPPVV++MDYN               KSAA RMD KELKMGYNID HDY VRLRAA+
Sbjct: 133 PDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAAR 192

Query: 137 KFLKDGDKVKVIVNLKGRENDFRKNAIDLLHRFRNDIGELGIEES 3
           KFLKDGDKVKVIVNLKGREN+FR NAI+LL RF+ND+GEL  EES
Sbjct: 193 KFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEES 237


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
           gi|297743667|emb|CBI36550.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  226 bits (575), Expect = 4e-57
 Identities = 133/234 (56%), Positives = 161/234 (68%), Gaps = 13/234 (5%)
 Frame = -1

Query: 665 MARVTTSCIVPPF-------KHPIFVSSLQSKFSSLRLQFPNL-----YVTCCYR-ITCR 525
           MA +T+     PF         P++ S L S+   +RL  P       + +  +R +T R
Sbjct: 1   MAGLTSGIPFKPFIFRTKTTSSPLYFS-LDSQLFGVRLCSPTFSKCRSFSSSLHRSVTAR 59

Query: 524 YGGGGNSRQEDSRRPQQTSFDADPALDVSTIRSNIVRLIDDQQNMVGIVSKSAAIQMAED 345
           YGG  +S   D+ R +Q   D D ALDVS+IRS  VRLID+QQNMVG+VSKS AIQMAED
Sbjct: 60  YGGYRSSG--DAWRSRQRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAED 117

Query: 344 AELDLVILSPDADPPVVKLMDYNXXXXXXXXXXXXXXXKSAALRMDQKELKMGYNIDVHD 165
           AELDLV+LSPDADPPVV++MDYN               KSAA RMD KELKMGYNID HD
Sbjct: 118 AELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHD 177

Query: 164 YSVRLRAAQKFLKDGDKVKVIVNLKGRENDFRKNAIDLLHRFRNDIGELGIEES 3
           YSVRL+AA+KFL+DGDKVK+IVNLKGREN+FR  AI+L+ RF+ND+GEL  EES
Sbjct: 178 YSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEES 231


>ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycine max]
           gi|255638877|gb|ACU19741.1| unknown [Glycine max]
          Length = 275

 Score =  224 bits (571), Expect = 1e-56
 Identities = 139/236 (58%), Positives = 156/236 (66%), Gaps = 15/236 (6%)
 Frame = -1

Query: 665 MARVTTSCIVPPFK---HPIFVSSLQSKFSSLRLQFP--------NLYVTCCYRITCRY- 522
           MA +TTS    PFK    P   SS  SK   L L  P        +L  T    +  RY 
Sbjct: 1   MAGITTS----PFKLSHFPTLFSSSDSKLFGLPLSNPYSLKFDPSSLSTTSLSYVKARYY 56

Query: 521 -GGGGNSRQ-EDSR-RPQQTSFDADPALDVSTIRSNIVRLIDDQQNMVGIVSKSAAIQMA 351
            GGGG  R   DSR R    S D D ALD+ST+RS+ VRLID  QNMVG+VS   AIQMA
Sbjct: 57  GGGGGPPRSPNDSRFRKSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAIQMA 116

Query: 350 EDAELDLVILSPDADPPVVKLMDYNXXXXXXXXXXXXXXXKSAALRMDQKELKMGYNIDV 171
           ED ELDLVILSPDADPPVV++MDY+               KSAA RMD KELKMGYNID 
Sbjct: 117 EDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKRGQQKKSAANRMDLKELKMGYNIDE 176

Query: 170 HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENDFRKNAIDLLHRFRNDIGELGIEES 3
           HDYSVRL+AAQKFLKDG+KVKVIVNLKGREN+FR  AI L+ RF+ND+GELGIEE+
Sbjct: 177 HDYSVRLKAAQKFLKDGNKVKVIVNLKGRENEFRNMAIALITRFQNDVGELGIEET 232


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
           gi|223526947|gb|EEF29148.1| translation initiation
           factor if-3, putative [Ricinus communis]
          Length = 274

 Score =  222 bits (566), Expect = 5e-56
 Identities = 125/208 (60%), Positives = 148/208 (71%), Gaps = 5/208 (2%)
 Frame = -1

Query: 611 VSSLQSKFSSLRLQF--PNLYVTCCYR---ITCRYGGGGNSRQEDSRRPQQTSFDADPAL 447
           +SSL+SK   LR     P+  ++        + R+GGG   R    RR +Q+  + D AL
Sbjct: 28  LSSLESKLFGLRFHCSKPDSLISLSRASVVTSARFGGG--FRSSGDRRSRQSDSEDDHAL 85

Query: 446 DVSTIRSNIVRLIDDQQNMVGIVSKSAAIQMAEDAELDLVILSPDADPPVVKLMDYNXXX 267
           D+STIRS  VRLID+QQNMVG+V KS AIQMAE+A LDLVILSPDADPPVV++MDYN   
Sbjct: 86  DISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENAALDLVILSPDADPPVVRIMDYNKYR 145

Query: 266 XXXXXXXXXXXXKSAALRMDQKELKMGYNIDVHDYSVRLRAAQKFLKDGDKVKVIVNLKG 87
                       KSAA RMD KELKMGYNID HDY VRLRAA+KFLKDGDKVKVIVNLKG
Sbjct: 146 YELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKG 205

Query: 86  RENDFRKNAIDLLHRFRNDIGELGIEES 3
           REN+FR  AI+L+ RF+ND+GEL  EE+
Sbjct: 206 RENEFRNIAIELIRRFQNDVGELATEET 233


>ref|XP_003519163.1| PREDICTED: translation initiation factor IF-3-like isoform 1
           [Glycine max]
          Length = 275

 Score =  222 bits (565), Expect = 6e-56
 Identities = 135/236 (57%), Positives = 153/236 (64%), Gaps = 15/236 (6%)
 Frame = -1

Query: 665 MARVTTSCIVPPFK--HPIFVSSLQSKFSSLRLQFP--------NLYVTCCYRITCRYGG 516
           MA +TT     PFK  H    S+  SK   L L  P        +L  T    +T RY G
Sbjct: 1   MAGITTF----PFKLSHCPLFSTSDSKLFGLPLSNPYSIKFDPSSLSSTSLPYVTARYYG 56

Query: 515 GGN-----SRQEDSRRPQQTSFDADPALDVSTIRSNIVRLIDDQQNMVGIVSKSAAIQMA 351
           GG      S  +   R    S D D ALD+ST+RS+ VRLID  QNMVG+VS   AIQMA
Sbjct: 57  GGGGASPRSPNDPRSRKSSDSDDDDKALDLSTLRSDTVRLIDQSQNMVGVVSIDDAIQMA 116

Query: 350 EDAELDLVILSPDADPPVVKLMDYNXXXXXXXXXXXXXXXKSAALRMDQKELKMGYNIDV 171
           ED ELDLVILSPDADPPVV++MDY+               KSAA RMD KELKMGYNID 
Sbjct: 117 EDVELDLVILSPDADPPVVRIMDYSKYRYEQQKKKREQQKKSAANRMDLKELKMGYNIDE 176

Query: 170 HDYSVRLRAAQKFLKDGDKVKVIVNLKGRENDFRKNAIDLLHRFRNDIGELGIEES 3
           HDYSVRL+AAQKFLKDGDKVKVIVNLKGREN+FR  AI L+ RF+ND+GELGIEE+
Sbjct: 177 HDYSVRLKAAQKFLKDGDKVKVIVNLKGRENEFRNMAIGLITRFQNDVGELGIEET 232


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