BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013332
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   185   8e-45
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro...   183   2e-44
ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precu...   182   7e-44
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   180   2e-43
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      180   3e-43

>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  185 bits (469), Expect = 8e-45
 Identities = 97/140 (69%), Positives = 115/140 (82%), Gaps = 2/140 (1%)
 Frame = -3

Query: 524 PSITCFFKPQSSAVRLKANSKGVSELGFVSSQLSGLKISF-HQCPLPNNLSSTIKLP-LQ 351
           P+ TC     +S+ +L   +K  S+LGF++SQLSG++IS  H    P+++S+    P LQ
Sbjct: 11  PAATCSGVMTTSSTKLHFRTKPSSDLGFLTSQLSGIRISSNHSLISPSSISTAPLRPSLQ 70

Query: 350 PVARRICPFTGKKSNRKNLVSHSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKT 171
           PVARRICPFTGKK+N+KNLVS SNHKTKKLQFVNLQYK+VWWEAGKRFVKLRLSTKALKT
Sbjct: 71  PVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKT 130

Query: 170 IEKNGLDAVAKKAGIDLTKK 111
           IEKNGLDAVAKKAGIDL K+
Sbjct: 131 IEKNGLDAVAKKAGIDLRKE 150


>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  183 bits (465), Expect = 2e-44
 Identities = 97/140 (69%), Positives = 114/140 (81%), Gaps = 2/140 (1%)
 Frame = -3

Query: 524 PSITCFFKPQSSAVRLKANSKGVSELGFVSSQLSGLKISF-HQCPLPNNLSSTIKLP-LQ 351
           P+ TC     +S+ +L   +K  S+LGF++SQLSG++IS  H    P ++S+    P LQ
Sbjct: 11  PAATCSGVMTTSSTKLHFRTKPNSDLGFLTSQLSGIRISSNHSLISPASISTAPLRPSLQ 70

Query: 350 PVARRICPFTGKKSNRKNLVSHSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKT 171
           PVARRICPFTGKK+N+KNLVS SNHKTKKLQFVNLQYK+VWWEAGKRFVKLRLSTKALKT
Sbjct: 71  PVARRICPFTGKKANKKNLVSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKT 130

Query: 170 IEKNGLDAVAKKAGIDLTKK 111
           IEKNGLDAVAKKAGIDL K+
Sbjct: 131 IEKNGLDAVAKKAGIDLRKE 150


>ref|XP_002528814.1| 50S ribosomal protein L28, chloroplast precursor, putative [Ricinus
           communis] gi|223531726|gb|EEF33548.1| 50S ribosomal
           protein L28, chloroplast precursor, putative [Ricinus
           communis]
          Length = 143

 Score =  182 bits (461), Expect = 7e-44
 Identities = 105/155 (67%), Positives = 122/155 (78%), Gaps = 3/155 (1%)
 Frame = -3

Query: 566 MALLTASSGLATGQPSITCFFKPQSSAVRLKANSK--GVSELGFVSSQLSGLKISFHQCP 393
           MA+ TASSGL        CF +P     +L ++SK   VSE+GFV+SQLSG+KIS++   
Sbjct: 1   MAMATASSGLL-------CFRRPYLPT-KLASSSKTSAVSEIGFVTSQLSGIKISYN--- 49

Query: 392 LPNNLSSTIKLPLQP-VARRICPFTGKKSNRKNLVSHSNHKTKKLQFVNLQYKRVWWEAG 216
           LP  LS+    PLQ  VARR+CPFTGKK+NR N VS SNHKTKKLQFVNLQYK++WWEAG
Sbjct: 50  LPY-LSNPTTPPLQSIVARRVCPFTGKKANRANKVSFSNHKTKKLQFVNLQYKKIWWEAG 108

Query: 215 KRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLTKK 111
           KR+VKLRLSTKALKTIEKNGLDAVAKKAGIDL+KK
Sbjct: 109 KRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLSKK 143


>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  180 bits (457), Expect = 2e-43
 Identities = 96/120 (80%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
 Frame = -3

Query: 467 SKGVSELGFVSSQLSGLKISF-HQCPLPNNLSSTIKLPLQPVARRICPFTGKKSNRKNLV 291
           SK  SEL FV+SQLSGLKIS  H       LS   K  LQPVARRICPFTGKKSNR N V
Sbjct: 32  SKLSSELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKV 91

Query: 290 SHSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLTKK 111
           SHSNHKTKKLQFVNLQYKR+WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDL+KK
Sbjct: 92  SHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  180 bits (456), Expect = 3e-43
 Identities = 97/135 (71%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
 Frame = -3

Query: 512 CFFKPQSSAVRLKANSKGVSELGFVSSQLSGLKISFHQCPLPNNLSSTIKLPLQPV-ARR 336
           CF K Q  ++  K +   VSE+GFV+SQLSG++IS++    P  LS+     LQPV ARR
Sbjct: 23  CFRKTQQLSIS-KTSLVSVSEIGFVTSQLSGIRISYNP---PEPLSAPFSPALQPVIARR 78

Query: 335 ICPFTGKKSNRKNLVSHSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNG 156
           ICPFTGKK+NR N VS SNHKTKKLQFVNLQYKRVWWEAGKR+VKLRLSTKALKTIEKNG
Sbjct: 79  ICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNG 138

Query: 155 LDAVAKKAGIDLTKK 111
           LDAVAKKAGIDL KK
Sbjct: 139 LDAVAKKAGIDLRKK 153