BLASTX nr result

ID: Atractylodes22_contig00013320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013320
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [V...   409   e-112
ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis ...   406   e-111
ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [C...   376   e-102
ref|NP_194093.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA bindin...   367   3e-99
gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]          366   6e-99

>ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
           gi|297735240|emb|CBI17602.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  409 bits (1051), Expect = e-112
 Identities = 199/252 (78%), Positives = 224/252 (88%)
 Frame = -3

Query: 994 RQMLTRGLLLRHFRQSSTAAALVQDYDEAPLTYLEGFPKPDPKYAETIRALPRALSGKNI 815
           RQ+LT  L LRHF QS+ AA L    +  PLTYLEGFP+PDPK+AE IRA+PR +SGKNI
Sbjct: 7   RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 814 SAKERKAGRVPGIVFEQEDGQHGGNKRLISVQNNQIKKLVNHLGRDYFLSRLFDLEVRPD 635
           SAKERK GRVP IVFEQEDGQHGGNKRLISV+ NQI+KLVNHLGR +FLSRLFDLEV PD
Sbjct: 67  SAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVGPD 126

Query: 634 VESEDIIEKVRVLPRLLHLHAATDAVLNVTFIRAPSHALLKVDVPLVFIGDDVSPGLKKG 455
            ES ++IEKVRVLPR LHLHA TDAVLNVTFIRAPSHALLKVDVPLVF G+DVSPGLKKG
Sbjct: 127 FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 454 SYLNIIKRTVKFICPADVIPPFIEVDLSELDVGQKLVMGDLKVHPALKLVRSKDEPICKI 275
           +YLN IKRTVK++CPAD+IPP+I+VDLSELD GQK+VMGDLKVHPALKL+RSKDEP+CKI
Sbjct: 187 AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 274 AGARVTEQKKSK 239
            G RV++Q+KSK
Sbjct: 247 MGTRVSDQRKSK 258


>ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
           gi|297742259|emb|CBI34408.3| unnamed protein product
           [Vitis vinifera]
          Length = 258

 Score =  406 bits (1044), Expect = e-111
 Identities = 198/252 (78%), Positives = 223/252 (88%)
 Frame = -3

Query: 994 RQMLTRGLLLRHFRQSSTAAALVQDYDEAPLTYLEGFPKPDPKYAETIRALPRALSGKNI 815
           RQ+LT  L LRHF QS+ AA L    +  PLTYLEGFP+PDPK+AE IRA+PR +SGKNI
Sbjct: 7   RQILTNALHLRHFSQSAAAAVLQDPLEPPPLTYLEGFPRPDPKFAEIIRAIPRTISGKNI 66

Query: 814 SAKERKAGRVPGIVFEQEDGQHGGNKRLISVQNNQIKKLVNHLGRDYFLSRLFDLEVRPD 635
           SAKERK GRVP IVFEQEDGQHGGNKRLISV+ NQI+KLVNHLGR +FLSRLFDLEV P 
Sbjct: 67  SAKERKVGRVPSIVFEQEDGQHGGNKRLISVKTNQIRKLVNHLGRSFFLSRLFDLEVGPH 126

Query: 634 VESEDIIEKVRVLPRLLHLHAATDAVLNVTFIRAPSHALLKVDVPLVFIGDDVSPGLKKG 455
            ES ++IEKVRVLPR LHLHA TDAVLNVTFIRAPSHALLKVDVPLVF G+DVSPGLKKG
Sbjct: 127 FESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSHALLKVDVPLVFRGEDVSPGLKKG 186

Query: 454 SYLNIIKRTVKFICPADVIPPFIEVDLSELDVGQKLVMGDLKVHPALKLVRSKDEPICKI 275
           +YLN IKRTVK++CPAD+IPP+I+VDLSELD GQK+VMGDLKVHPALKL+RSKDEP+CKI
Sbjct: 187 AYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIVMGDLKVHPALKLLRSKDEPVCKI 246

Query: 274 AGARVTEQKKSK 239
            G RV++Q+KSK
Sbjct: 247 MGTRVSDQRKSK 258


>ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
           gi|449494761|ref|XP_004159639.1| PREDICTED: 50S
           ribosomal protein L25-like [Cucumis sativus]
          Length = 260

 Score =  376 bits (966), Expect = e-102
 Identities = 193/251 (76%), Positives = 219/251 (87%), Gaps = 2/251 (0%)
 Frame = -3

Query: 985 LTRGLLLRHFRQSSTAAALVQDYDEAPL-TYLEGFPKPDPKYAETIRALPRALSGKNISA 809
           L+R LL R+   ++ A A   D    PL +YLEGFPKPDPKYAETI A+PR++SGK+ISA
Sbjct: 10  LSRVLLRRYSAATAPATAPAFDSVSEPLFSYLEGFPKPDPKYAETILAIPRSISGKSISA 69

Query: 808 KERKAGRVPGIVFEQEDGQHGGNKRLISVQNNQIKKLVNHLGRDYFLSRLFDLEVRPDVE 629
           KERKAGRVP IVFEQEDGQHGGNKRLISV+ NQI KLV +LGR +FLSRLFDLEV  D E
Sbjct: 70  KERKAGRVPSIVFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSRLFDLEVLSDFE 129

Query: 628 SEDIIEKVRVLPRLLHLHAATDAVLNVTFIRAPSHALLKVDVPLVFIGDDVSPGLKKGSY 449
           S DI+EKVRVLPR +HLHA TDA LNVTFIRAPSHA+LKVDVPLVF G+DV PGL+KGSY
Sbjct: 130 SGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGEDVCPGLRKGSY 189

Query: 448 LNIIKRTVKFICPADVIPPFIEVDLSELDVGQKLVMGDLKVHPALKLVRSKDEPICKIAG 269
           LN IKRTVK++CPAD+IPP+I+VDLSELDVGQKLVMGDLKVHPALKLV+SKDEP+CKIAG
Sbjct: 190 LNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVKSKDEPVCKIAG 249

Query: 268 ARVT-EQKKSK 239
           ARV+ +QKKSK
Sbjct: 250 ARVSDQQKKSK 260


>ref|NP_194093.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
           protein [Arabidopsis thaliana]
           gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis
           thaliana] gi|7269210|emb|CAB79317.1| putative protein
           [Arabidopsis thaliana] gi|18253005|gb|AAL62429.1|
           putative protein [Arabidopsis thaliana]
           gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis
           thaliana] gi|21594031|gb|AAM65949.1| unknown
           [Arabidopsis thaliana] gi|332659385|gb|AEE84785.1|
           ribosomal L25/TL5/CTC N-terminal 5S rRNA binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 264

 Score =  367 bits (942), Expect = 3e-99
 Identities = 181/247 (73%), Positives = 214/247 (86%), Gaps = 1/247 (0%)
 Frame = -3

Query: 967 LRHFRQSSTAAALVQDYDEAPLTYLEGFPKPDPKYAETIRALPRALSGKNISAKERKAGR 788
           LR F  ++ AA  +    E  LTYL GFP+PDPK+AETI A+PR++SGK+ISAKERKAGR
Sbjct: 16  LRLFSPAANAALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAGR 75

Query: 787 VPGIVFEQEDGQHGGNKRLISVQNNQIKKLVNHLGRDYFLSRLFDLEVRPDVESEDIIEK 608
           VP I+FEQEDGQHGGNKRLISVQ NQI+KLVNHLG  +FLSRLFD+EVR ++ S+++IEK
Sbjct: 76  VPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEK 135

Query: 607 VRVLPRLLHLHAATDAVLNVTFIRAPSHALLKVDVPLVFIGDDVSPGLKKGSYLNIIKRT 428
           VR LPR +HLH+ TDA LNVTFIRAP  ALLKVD+PLVFIGDDVSPGLKKG+ LN IKRT
Sbjct: 136 VRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRT 195

Query: 427 VKFICPADVIPPFIEVDLSELDVGQKLVMGDLKVHPALKLVRSKDEPICKIAGARVTE-Q 251
           VKF+CPA++IPP+IEVDLS+LD+GQKLVMGDLKVHPALKL++SKDEPI K+AG RVT+ Q
Sbjct: 196 VKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDTQ 255

Query: 250 KKSK*SQ 230
           KKS  +Q
Sbjct: 256 KKSSDTQ 262


>gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
          Length = 251

 Score =  366 bits (939), Expect = 6e-99
 Identities = 191/257 (74%), Positives = 215/257 (83%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1006 MLASRQMLTRGLLLRHFRQ-SSTAAALVQDYDEAPLTYLEGFPKPDPKYAETIRALPRAL 830
            ML  R  LT  L   H R  S++AAA+V  Y E        FPKPDPKY ETI A+ RA 
Sbjct: 1    MLIRRVALTASLHHYHLRFFSNSAAAVVLPYPEPE------FPKPDPKYDETIHAIARAK 54

Query: 829  SGKNISAKERKAGRVPGIVFEQEDGQHGGNKRLISVQNNQIKKLVNHLGRDYFLSRLFDL 650
            SGKNI+AKERKAGRVP IVFEQEDGQHGGNKRLISVQ NQI+KLVNHLGR +FLSRLFDL
Sbjct: 55   SGKNIAAKERKAGRVPSIVFEQEDGQHGGNKRLISVQANQIRKLVNHLGRSHFLSRLFDL 114

Query: 649  EVRPDVESEDIIEKVRVLPRLLHLHAATDAVLNVTFIRAPSHALLKVDVPLVFIGDDVSP 470
            EVRPD +S +++EKVRVLPR +HL A +DA LNVTFIRAPS ALLKVDVPL+F G+DVSP
Sbjct: 115  EVRPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSSALLKVDVPLIFRGEDVSP 174

Query: 469  GLKKGSYLNIIKRTVKFICPADVIPPFIEVDLSELDVGQKLVMGDLKVHPALKLVRSKDE 290
            GLKKGSYLNIIKRTVK++CPADVIPP+I+VDLSELDVGQKLVMGDLKVHPALKLV+ KD 
Sbjct: 175  GLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVQPKDH 234

Query: 289  PICKIAGARVTEQKKSK 239
            P+ KI GARV++QKK+K
Sbjct: 235  PVVKIMGARVSDQKKAK 251


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