BLASTX nr result

ID: Atractylodes22_contig00013270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013270
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea m...   105   9e-21
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   105   9e-21
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   104   1e-20
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   103   3e-20
dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]     103   3e-20

>tpg|DAA40943.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 1450

 Score =  105 bits (262), Expect = 9e-21
 Identities = 53/81 (65%), Positives = 61/81 (75%)
 Frame = -3

Query: 500  SGKTT*LTQYLHEDGYTTSDIVGCTQPRHVATMSAAKRGSKEMETRLGDLVRFATRFEDV 321
            SGKTT LTQYLHEDGYTT+ +VGCTQPR VA MS AKR S+EMET LGD V +A RFEDV
Sbjct: 780  SGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIRFEDV 839

Query: 320  TGPKSIINALLRRATLYEMIR 258
            TGP +II  +     L E ++
Sbjct: 840  TGPNTIIKYMTDGVLLRETLK 860


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
           gi|241926289|gb|EER99433.1| hypothetical protein
           SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  105 bits (262), Expect = 9e-21
 Identities = 53/81 (65%), Positives = 61/81 (75%)
 Frame = -3

Query: 500 SGKTT*LTQYLHEDGYTTSDIVGCTQPRHVATMSAAKRGSKEMETRLGDLVRFATRFEDV 321
           SGKTT LTQYLHEDGYTT+ +VGCTQPR VA MS AKR S+EMET LGD V +A RFEDV
Sbjct: 601 SGKTTQLTQYLHEDGYTTTGVVGCTQPRRVAAMSVAKRVSEEMETDLGDKVGYAIRFEDV 660

Query: 320 TGPKSIINALLRRATLYEMIR 258
           TGP +II  +     L E ++
Sbjct: 661 TGPNTIIKYMTDGVLLRETLK 681


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Glycine max]
          Length = 1270

 Score =  104 bits (260), Expect = 1e-20
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -3

Query: 500 SGKTT*LTQYLHEDGYTTSDIVGCTQPRHVATMSAAKRGSKEMETRLGDLVRFATRFEDV 321
           SGKTT LTQYLHEDGYT   IVGCTQPR VA MS AKR S+EM+T LGD V +A RFEDV
Sbjct: 599 SGKTTQLTQYLHEDGYTIGGIVGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDV 658

Query: 320 TGPKSIINALLRRATLYEMIR 258
           TGPK+II  +     L E ++
Sbjct: 659 TGPKTIIKYMTDGVLLRETLK 679


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  103 bits (258), Expect = 3e-20
 Identities = 55/80 (68%), Positives = 61/80 (76%), Gaps = 4/80 (5%)
 Frame = -3

Query: 500 SGKTT*LTQYLHEDGYTTSDIVGCTQPRHVATMSAAKRGSKEMETRLGDLVRFATRFEDV 321
           SGKTT LTQYLHEDGYTT+ IVGCTQPR VA MS AKR S+EMET LGD V +A RFEDV
Sbjct: 618 SGKTTQLTQYLHEDGYTTNGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDV 677

Query: 320 TGP----KSIINALLRRATL 273
           TGP    K + + +L R TL
Sbjct: 678 TGPNTKIKYMTDGVLMRETL 697


>dbj|BAJ33947.1| unnamed protein product [Thellungiella halophila]
          Length = 1255

 Score =  103 bits (258), Expect = 3e-20
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -3

Query: 500 SGKTT*LTQYLHEDGYTTSDIVGCTQPRHVATMSAAKRGSKEMETRLGDLVRFATRFEDV 321
           SGKTT LTQYLHEDGYT + IVGCTQPR VA MS AKR S+EMET LGD V +A RFEDV
Sbjct: 585 SGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAMSVAKRVSEEMETELGDKVGYAIRFEDV 644

Query: 320 TGPKSIINALLRRATLYEMIR 258
           TGP ++I  +     L E ++
Sbjct: 645 TGPNTVIKYMTDGVLLRETLK 665