BLASTX nr result

ID: Atractylodes22_contig00013236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013236
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li...   349   5e-94
emb|CBI19949.3| unnamed protein product [Vitis vinifera]              349   5e-94
ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li...   328   8e-88
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li...   326   4e-87
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235...   323   3e-86

>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
          Length = 572

 Score =  349 bits (896), Expect = 5e-94
 Identities = 174/239 (72%), Positives = 202/239 (84%), Gaps = 2/239 (0%)
 Frame = -2

Query: 713 KGEECTISDTNNAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGFMPSWVF 534
           K E  T +  ++ FFD+YGP+AKA V FKTP+A+STLNL+DVQGLVTWVLAEGFMPSW+F
Sbjct: 14  KPESATNATASSTFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIF 73

Query: 533 IKNKPLIPKVVLLYVPGLDAAIFLSQSKILHSLKESCGIPRAVLAPSCVSDGMQTIDALL 354
           IKNKPLIPKVV+LYVPGLDAA+++SQSKIL  LKE CG PRAVLA SCVSD MQTIDALL
Sbjct: 74  IKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALL 133

Query: 353 TCKLKRKR-EADSFTKKCGPVSEPGTCP-IRDDLSLAELIKDIPFPISYYTLTAKELEDN 180
           TCKLKRKR E DS  KK    SE G C    ++ S  E++KD+PFPI+YYTLTAKELEDN
Sbjct: 134 TCKLKRKRNEVDSALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDN 193

Query: 179 GYCHDQPGFLSTLPAPSGKPTHEMVGVDCEMCITNEGFELTRVTLVDFKGQVLLDKLVK 3
           GYCHDQPGF+STLPAPSG   +EM+ +DCEMC+T+EGFELTR++LVD KGQV+LDKLVK
Sbjct: 194 GYCHDQPGFVSTLPAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVK 252


>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  349 bits (896), Expect = 5e-94
 Identities = 174/239 (72%), Positives = 202/239 (84%), Gaps = 2/239 (0%)
 Frame = -2

Query: 713 KGEECTISDTNNAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGFMPSWVF 534
           K E  T +  ++ FFD+YGP+AKA V FKTP+A+STLNL+DVQGLVTWVLAEGFMPSW+F
Sbjct: 14  KPESATNATASSTFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPSWIF 73

Query: 533 IKNKPLIPKVVLLYVPGLDAAIFLSQSKILHSLKESCGIPRAVLAPSCVSDGMQTIDALL 354
           IKNKPLIPKVV+LYVPGLDAA+++SQSKIL  LKE CG PRAVLA SCVSD MQTIDALL
Sbjct: 74  IKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTIDALL 133

Query: 353 TCKLKRKR-EADSFTKKCGPVSEPGTCP-IRDDLSLAELIKDIPFPISYYTLTAKELEDN 180
           TCKLKRKR E DS  KK    SE G C    ++ S  E++KD+PFPI+YYTLTAKELEDN
Sbjct: 134 TCKLKRKRNEVDSALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKELEDN 193

Query: 179 GYCHDQPGFLSTLPAPSGKPTHEMVGVDCEMCITNEGFELTRVTLVDFKGQVLLDKLVK 3
           GYCHDQPGF+STLPAPSG   +EM+ +DCEMC+T+EGFELTR++LVD KGQV+LDKLVK
Sbjct: 194 GYCHDQPGFVSTLPAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKLVK 252


>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 576

 Score =  328 bits (842), Expect = 8e-88
 Identities = 169/251 (67%), Positives = 198/251 (78%), Gaps = 2/251 (0%)
 Frame = -2

Query: 749 SSETMDSPVNSRKGEECTISDTN-NAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVT 573
           SSE  +  +   + EE + S+     F+DVYGP+ KA + F +PE NSTLNL DVQGLVT
Sbjct: 12  SSEAENEALRGAEEEEGSTSNKKCGKFYDVYGPEGKADIVFNSPEDNSTLNLSDVQGLVT 71

Query: 572 WVLAEGFMPSWVFIKNKPLIPKVVLLYVPGLDAAIFLSQSKILHSLKESCGIPRAVLAPS 393
           WVL+EGFMPSWVFIKNKPLIPKVV+LYVPGLDAA+FLSQSK+L  LK+ CG PRA+LA S
Sbjct: 72  WVLSEGFMPSWVFIKNKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKKFCGKPRALLALS 131

Query: 392 CVSDGMQTIDALLTCKLKRKR-EADSFTKKCGPVSEPGTCPIRDDLSLAELIKDIPFPIS 216
           CVSDGMQTIDALLTCK+KRKR E  S   K    S+      +D LS  EL KDIPFP++
Sbjct: 132 CVSDGMQTIDALLTCKMKRKRDENSSIMGKFARTSQ------QDSLSFKELTKDIPFPVT 185

Query: 215 YYTLTAKELEDNGYCHDQPGFLSTLPAPSGKPTHEMVGVDCEMCITNEGFELTRVTLVDF 36
           YYTLT KELE+NGY  ++PGFLSTLPAPSG P +EM+ +DCEMCIT+EGFELTR+TLVD 
Sbjct: 186 YYTLTEKELEENGYSVNKPGFLSTLPAPSGSPFYEMLALDCEMCITSEGFELTRITLVDV 245

Query: 35  KGQVLLDKLVK 3
           KGQVL+DKLVK
Sbjct: 246 KGQVLIDKLVK 256


>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
          Length = 567

 Score =  326 bits (836), Expect = 4e-87
 Identities = 164/236 (69%), Positives = 190/236 (80%), Gaps = 1/236 (0%)
 Frame = -2

Query: 707 EECTISDTNNAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGFMPSWVFIK 528
           E+ T +     F+D+YGP+ KA V F +PE NSTLNL DVQGLVTWVL EGFMPSWVFIK
Sbjct: 18  EDSTSTKKRGKFYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIK 77

Query: 527 NKPLIPKVVLLYVPGLDAAIFLSQSKILHSLKESCGIPRAVLAPSCVSDGMQTIDALLTC 348
           NKPLIPKVV+LYVPGLDAA+FLSQSK+L  LK  CG PRAVLA SCVSDGMQTIDALLTC
Sbjct: 78  NKPLIPKVVMLYVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTC 137

Query: 347 KLKRKR-EADSFTKKCGPVSEPGTCPIRDDLSLAELIKDIPFPISYYTLTAKELEDNGYC 171
           K+KRKR E  S  +K    S+      +D LS  EL KDIPFP++YYTLT KELE+NGY 
Sbjct: 138 KMKRKRDENSSIMRKSALTSQ------QDSLSFKELTKDIPFPVTYYTLTEKELEENGYS 191

Query: 170 HDQPGFLSTLPAPSGKPTHEMVGVDCEMCITNEGFELTRVTLVDFKGQVLLDKLVK 3
            ++PGFLSTLPAPSG P ++M+ +DCEMCIT+EGFEL+R+TLVD KGQVL+DKLVK
Sbjct: 192 VNKPGFLSTLPAPSGSPFYDMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVK 247


>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
           rnase h, putative [Ricinus communis]
          Length = 572

 Score =  323 bits (828), Expect = 3e-86
 Identities = 164/244 (67%), Positives = 196/244 (80%), Gaps = 3/244 (1%)
 Frame = -2

Query: 725 VNSRKGEECTISDTN--NAFFDVYGPQAKAGVEFKTPEANSTLNLEDVQGLVTWVLAEGF 552
           V+S K ++ T +  N  N +FD+YGPQAKA + FK PEAN TLNLEDVQGLVTWVLAEGF
Sbjct: 15  VSSSKEDDSTDNCNNITNNYFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLVTWVLAEGF 74

Query: 551 MPSWVFIKNKPLIPKVVLLYVPGLDAAIFLSQSKILHSLKESCGIPRAVLAPSCVSDGMQ 372
           MPSWVFIKNKPLIPKV +L++PGLDA+++LS SK+L S KE C  PRA+LA SCVSD MQ
Sbjct: 75  MPSWVFIKNKPLIPKVAMLFIPGLDASLYLSHSKLLASFKEYCSNPRALLALSCVSDVMQ 134

Query: 371 TIDALLTCKLKRKRE-ADSFTKKCGPVSEPGTCPIRDDLSLAELIKDIPFPISYYTLTAK 195
           T+DALLTCK+KRKR+ ADSF++K    SE G      DLS  EL+KD+PFP +YYTLT K
Sbjct: 135 TVDALLTCKMKRKRDRADSFSRKSMQTSEQG------DLSSIELMKDLPFPPTYYTLTTK 188

Query: 194 ELEDNGYCHDQPGFLSTLPAPSGKPTHEMVGVDCEMCITNEGFELTRVTLVDFKGQVLLD 15
           +LE+N Y   QPGF+STLPAPSG   ++M+ +DCEMCIT EGFELTRVT+VD KGQV+LD
Sbjct: 189 QLEENDYPISQPGFVSTLPAPSGSSAYDMLALDCEMCITKEGFELTRVTVVDVKGQVVLD 248

Query: 14  KLVK 3
           KLVK
Sbjct: 249 KLVK 252


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