BLASTX nr result

ID: Atractylodes22_contig00013232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013232
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308117.1| predicted protein [Populus trichocarpa] gi|2...   124   4e-26
ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255...   122   1e-25
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   118   2e-24
ref|XP_002867378.1| hypothetical protein ARALYDRAFT_491758 [Arab...   117   4e-24
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   115   2e-23

>ref|XP_002308117.1| predicted protein [Populus trichocarpa] gi|222854093|gb|EEE91640.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  124 bits (310), Expect = 4e-26
 Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 26/133 (19%)
 Frame = +2

Query: 470 FNQDGSRKRLVILIFFAVLVYLYQTGALAPIIRWLSQGMQRA----QQPRPG------GA 619
           FNQDGSR+RL++L+FFA LVYLYQTGAL P++RWLSQ MQRA    + PRP       GA
Sbjct: 115 FNQDGSRQRLLVLVFFASLVYLYQTGALTPLVRWLSQSMQRAAVPPRPPRPAARVENAGA 174

Query: 620 ARQ-------------ENENAPLAXXXXXXXXXXXXXXXXXX---RWWGVVKEIQLIVFG 751
            RQ             ENEN P                       RWWG+VKEIQ+IVFG
Sbjct: 175 PRQNEYIALAEGQAGVENENRPTEDGNQAAENENVAEPGGDNGGHRWWGIVKEIQMIVFG 234

Query: 752 FITSLLPGFHNID 790
           FITSLLPGFHNID
Sbjct: 235 FITSLLPGFHNID 247


>ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255532 [Vitis vinifera]
           gi|296090285|emb|CBI40104.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  122 bits (306), Expect = 1e-25
 Identities = 70/135 (51%), Positives = 78/135 (57%), Gaps = 28/135 (20%)
 Frame = +2

Query: 470 FNQDGSRKRLVILIFFAVLVYLYQTGALAPIIRWLSQGMQRA----QQPRPG-------G 616
           FNQDGSR+RLVIL+FFA L+YL+QTGAL P IRWLSQGMQRA    Q PRP         
Sbjct: 156 FNQDGSRQRLVILVFFASLIYLHQTGALTPFIRWLSQGMQRAAAPPQPPRPAVRAENVPA 215

Query: 617 AARQENENAPLA-----------------XXXXXXXXXXXXXXXXXXRWWGVVKEIQLIV 745
           A RQ NENA +A                                    WWG+VKEIQ+IV
Sbjct: 216 AVRQGNENAAMAEGQAGAADQNQQAEDGNEAIENENIAEGGGGDGGNHWWGIVKEIQMIV 275

Query: 746 FGFITSLLPGFHNID 790
            GFITSLLPGFHN+D
Sbjct: 276 VGFITSLLPGFHNVD 290


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
           communis] gi|223551394|gb|EEF52880.1| brca1 interacting
           protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  118 bits (295), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 67/85 (78%)
 Frame = +2

Query: 2   DPEVDHLSGMPCTVLEGLFSSLTYFFFEDGRHICDYQLALQCHMKSDARLAGGDWPCTFS 181
           +P++ HLSGM   VLEGLFSSLTYFF  +G H+ DYQLALQ H+K D +   G+W  T S
Sbjct: 401 EPDIAHLSGMAVIVLEGLFSSLTYFFSRNGCHVSDYQLALQRHIKRDRKSPVGEWTLTLS 460

Query: 182 LWCLNPALVFKNIADSSLSVILTSG 256
           LWCLNPA+VF++IAD SLSVILTSG
Sbjct: 461 LWCLNPAVVFRDIADLSLSVILTSG 485


>ref|XP_002867378.1| hypothetical protein ARALYDRAFT_491758 [Arabidopsis lyrata subsp.
           lyrata] gi|297313214|gb|EFH43637.1| hypothetical protein
           ARALYDRAFT_491758 [Arabidopsis lyrata subsp. lyrata]
          Length = 283

 Score =  117 bits (293), Expect = 4e-24
 Identities = 65/128 (50%), Positives = 77/128 (60%), Gaps = 21/128 (16%)
 Frame = +2

Query: 470 FNQDGSRKRLVILIFFAVLVYLYQTGALAPIIRWLSQGMQRAQQPRPGG---AARQENEN 640
           FNQDGSR+RL +L+ FA ++YLYQTGALAP +RWLSQGM RA  P P     AAR +N+ 
Sbjct: 156 FNQDGSRQRLAVLVIFATIIYLYQTGALAPFVRWLSQGMHRAAVPPPRPHRPAARADNDP 215

Query: 641 A---PL---------------AXXXXXXXXXXXXXXXXXXRWWGVVKEIQLIVFGFITSL 766
           A   PL               A                  +WWG+VKEIQ+IVFGFITSL
Sbjct: 216 AAAVPLNENAVPEGEENEADNANRANANENENVDAGNQGNQWWGIVKEIQMIVFGFITSL 275

Query: 767 LPGFHNID 790
           LPGFHNI+
Sbjct: 276 LPGFHNIE 283


>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  115 bits (287), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = +2

Query: 2   DPEVDHLSGMPCTVLEGLFSSLTYFFFEDGRHICDYQLALQCHMKSDARLAGGDWPCTFS 181
           +  V HLSGM    LEGL+S+L+YFF E+G H  DYQLALQ ++K DA    G W CTFS
Sbjct: 395 ESRVAHLSGMSVITLEGLYSALSYFFSENGLHTVDYQLALQRYVKKDAGSVAGSWTCTFS 454

Query: 182 LWCLNPALVFKNIADSSLSVILTSG 256
           LWCLNPA+VF+ IAD SLSVILTSG
Sbjct: 455 LWCLNPAVVFRGIADLSLSVILTSG 479


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