BLASTX nr result

ID: Atractylodes22_contig00013223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013223
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subc...   147   9e-34
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   145   4e-33
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   144   7e-33
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   144   1e-32
gb|ABJ96383.1| hypothetical protein [Prunus persica]                  144   1e-32

>gb|ABA94310.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1762

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/91 (75%), Positives = 79/91 (86%)
 Frame = -1

Query: 275  RRSTGGFAIYFGSNLVSWCARKQKTVSRSSTESEYKALADAVTELTWLQSLLRELQVPVR 96
            RRSTGGF IYFG NLVSW ARKQ+TVSRSSTE+EYKA+A+A  EL W++S+L EL V + 
Sbjct: 1623 RRSTGGFVIYFGPNLVSWSARKQRTVSRSSTEAEYKAMANATAELIWVRSVLEELGVKID 1682

Query: 95   STPNLWCDNLGATYLSANPVFHARTKHIEID 3
             +P LWCDNLGATYLS+NPVFHARTKHIEID
Sbjct: 1683 QSPVLWCDNLGATYLSSNPVFHARTKHIEID 1713


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = -1

Query: 275  RRSTGGFAIYFGSNLVSWCARKQKTVSRSSTESEYKALADAVTELTWLQSLLRELQVPVR 96
            RRSTGGFA++ G NLVSWCARKQ TVSRSSTESEYKALA+A  E+ W+Q+LL ELQV   
Sbjct: 1308 RRSTGGFAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSP 1367

Query: 95   STPNLWCDNLGATYLSANPVFHARTKHIEID 3
                LWCDNLGA YLS+NPVFHARTKHIE+D
Sbjct: 1368 PMAKLWCDNLGAKYLSSNPVFHARTKHIEVD 1398


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/91 (75%), Positives = 76/91 (83%)
 Frame = -1

Query: 275  RRSTGGFAIYFGSNLVSWCARKQKTVSRSSTESEYKALADAVTELTWLQSLLRELQVPVR 96
            RRSTGGFA++ G NLVSW ARKQ TVSRSSTESEYKALA+A  E+ W+Q+LL ELQV   
Sbjct: 1108 RRSTGGFAVFLGDNLVSWSARKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESP 1167

Query: 95   STPNLWCDNLGATYLSANPVFHARTKHIEID 3
            S   LWCDNLGA YLSANPVFHARTKHIE+D
Sbjct: 1168 SMAKLWCDNLGAKYLSANPVFHARTKHIEVD 1198


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/91 (73%), Positives = 78/91 (85%)
 Frame = -1

Query: 275  RRSTGGFAIYFGSNLVSWCARKQKTVSRSSTESEYKALADAVTELTWLQSLLRELQVPVR 96
            RRSTGGFA++ G NL+SW ARKQ TVSRSSTE+EYKALA+A TE+TW++ +L EL++   
Sbjct: 795  RRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARP 854

Query: 95   STPNLWCDNLGATYLSANPVFHARTKHIEID 3
            S   LWCDNLGATYLSANPVFHARTKHIEID
Sbjct: 855  SVAQLWCDNLGATYLSANPVFHARTKHIEID 885


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = -1

Query: 275 RRSTGGFAIYFGSNLVSWCARKQKTVSRSSTESEYKALADAVTELTWLQSLLRELQVPVR 96
           RRSTGGFAIY G NLVSW A+KQ TV+RSSTE+EY+A+A+  TE+TWL+SLL+EL     
Sbjct: 52  RRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWLRSLLQELGFSTS 111

Query: 95  STPNLWCDNLGATYLSANPVFHARTKHIEID 3
           ++P LWCDNLGATYLSANP+FHARTKH+EID
Sbjct: 112 TSPVLWCDNLGATYLSANPIFHARTKHVEID 142


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