BLASTX nr result

ID: Atractylodes22_contig00013198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013198
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]    129   5e-28
ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory...   124   2e-26
emb|CBI19898.3| unnamed protein product [Vitis vinifera]              122   1e-25
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...   121   1e-25

>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 125

 Score =  129 bits (325), Expect = 5e-28
 Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 7/119 (5%)
 Frame = -3

Query: 687 DFMFCGICGTMLSFDSRKYVRCPLCKFKKKAIDVAGKEIKYTVSEEQIRRELGLSSIEVS 508
           DF+FCG+CGT+L F+S +Y  CPLC FK+KA D+ GKE +Y V+ E IRREL +    V 
Sbjct: 8   DFLFCGVCGTLLDFNSHRYASCPLCGFKRKAKDIEGKETRYAVTAEDIRRELKIKPFVVL 67

Query: 507 GERTRSMDYNVR-------CPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDNT 352
            E   ++D  V+       CPKC++  + Y+T+Q RSADEGQT+FY CP CG+ F +NT
Sbjct: 68  -ESAPNLDIVVQRSLTERACPKCNHHELEYYTKQLRSADEGQTIFYECPECGHAFNENT 125


>ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|222857365|gb|EEE94912.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  127 bits (318), Expect = 3e-27
 Identities = 57/111 (51%), Positives = 78/111 (70%)
 Frame = -3

Query: 687 DFMFCGICGTMLSFDSRKYVRCPLCKFKKKAIDVAGKEIKYTVSEEQIRRELGLSSIEVS 508
           DFMFC +CGTM+   S+++V CPLCKFKK A D++ +EI Y VS E +RR+LG+S  E  
Sbjct: 8   DFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLGISHFEGK 67

Query: 507 GERTRSMDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 355
            E  + M+ N +C KC +  + + T+Q RSADEGQT F++C NC Y FT+N
Sbjct: 68  ME-VKDMEINKKCEKCGHTKLKFSTRQMRSADEGQTTFFHCANCSYTFTEN 117


>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
           gi|108710721|gb|ABF98516.1| Transcription factor S-II
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 126

 Score =  124 bits (311), Expect = 2e-26
 Identities = 58/118 (49%), Positives = 74/118 (62%), Gaps = 7/118 (5%)
 Frame = -3

Query: 687 DFMFCGICGTMLSFDSRKYVRCPLCKFKKKAIDVAGKEIKYTVSEEQIRRELGLSSIEVS 508
           DF+FCG+CGT+L FDS +   CPLC FK+KA D+ GKE +YTV+ E IRREL L    + 
Sbjct: 8   DFLFCGVCGTLLKFDSVRSASCPLCGFKRKAKDIEGKETRYTVTAEDIRRELKLDPYVIL 67

Query: 507 GERTRSMD-------YNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 355
               +  D        N  C KC N  + Y+T+Q RSADEGQT+FY C NC + F +N
Sbjct: 68  ETTLKEEDVIVERATVNKECEKCKNPELQYYTKQLRSADEGQTVFYKCANCRHEFNEN 125


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  122 bits (305), Expect = 1e-25
 Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 7/121 (5%)
 Frame = -3

Query: 693 QSDFMFCGICGTMLSFDSRKYVRCPLCKFKKKAIDVAGKEIKYTVSEEQIRRELG----- 529
           Q DFMFC +CGTML   S KY  CPLCK ++K  D++G+EI+YTVS E IRREL      
Sbjct: 6   QRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIEPFV 65

Query: 528 -LSSIEVSGERTRSMDYNVRCPKC-SNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFTDN 355
            L  I       ++     RC +C  +  +YY+T+Q RSADEGQT+FY C  CG+ ++ N
Sbjct: 66  KLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGHKWSQN 125

Query: 354 T 352
           T
Sbjct: 126 T 126


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score =  121 bits (304), Expect = 1e-25
 Identities = 59/121 (48%), Positives = 77/121 (63%), Gaps = 4/121 (3%)
 Frame = -3

Query: 708 MDSIHQSDFMFCGICGTMLSFDSRKYVRCPLCKFKKKAIDVAGKEIKYTVSEEQIRRELG 529
           M+   +S+F+FC +CGTML   S KY  CP CK  + A D+  KEI YTVS E IRRELG
Sbjct: 1   MEKSRESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELG 60

Query: 528 LSSIEVSGERTRS----MDYNVRCPKCSNKGVYYHTQQTRSADEGQTMFYNCPNCGYNFT 361
           +S   + GE+T++          C KC +  + Y T+QTRSADEGQT +Y CPNC + FT
Sbjct: 61  IS---LFGEKTQAEAELPKIKKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFT 117

Query: 360 D 358
           +
Sbjct: 118 E 118


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