BLASTX nr result

ID: Atractylodes22_contig00013184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013184
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263086.2| PREDICTED: putative clathrin assembly protei...    62   5e-08
emb|CAN73287.1| hypothetical protein VITISV_009769 [Vitis vinifera]    62   5e-08
ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus...    61   8e-08
gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]               60   2e-07
ref|XP_002284015.1| PREDICTED: putative clathrin assembly protei...    58   7e-07

>ref|XP_002263086.2| PREDICTED: putative clathrin assembly protein At4g40080-like [Vitis
           vinifera] gi|297745712|emb|CBI41037.3| unnamed protein
           product [Vitis vinifera]
          Length = 354

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/90 (37%), Positives = 47/90 (52%)
 Frame = +1

Query: 73  MRDLIGIVKDXXXXXXXXXXXXXXXXXXHVAVLRXXXXXXXXXXXXXXLATLLSLGNSSR 252
           +RDLIG +KD                  H+++LR              +A LLS GNSSR
Sbjct: 7   LRDLIGAIKDKASLSKAALLSKPNTLSLHLSLLRATTHEPSIPPHDKHIAALLSFGNSSR 66

Query: 253 ATASILIHSLFHRLHRTNDSYVALKCLLTI 342
           ATAS +I +L  RL  T+D+ VA+KCL+ +
Sbjct: 67  ATASAVIEALMDRLQNTHDASVAIKCLIAV 96


>emb|CAN73287.1| hypothetical protein VITISV_009769 [Vitis vinifera]
          Length = 354

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/90 (37%), Positives = 47/90 (52%)
 Frame = +1

Query: 73  MRDLIGIVKDXXXXXXXXXXXXXXXXXXHVAVLRXXXXXXXXXXXXXXLATLLSLGNSSR 252
           +RDLIG +KD                  H+++LR              +A LLS GNSSR
Sbjct: 7   LRDLIGAIKDKASLSRAALLSKPNTLSLHLSLLRATTHEPSIPPHDKHIAALLSFGNSSR 66

Query: 253 ATASILIHSLFHRLHRTNDSYVALKCLLTI 342
           ATAS +I +L  RL  T+D+ VA+KCL+ +
Sbjct: 67  ATASAVIEALMDRLQNTHDASVAIKCLIAV 96


>ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223526043|gb|EEF28409.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 271

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/92 (38%), Positives = 48/92 (52%)
 Frame = +1

Query: 67  ITMRDLIGIVKDXXXXXXXXXXXXXXXXXXHVAVLRXXXXXXXXXXXXXXLATLLSLGNS 246
           I +RDLIGI+KD                  H+A+LR              + T+LS G+S
Sbjct: 5   INLRDLIGIIKDKASQSKAAVIRKPKTFSLHLALLRATTHDPFTPPNSKHITTVLSYGHS 64

Query: 247 SRATASILIHSLFHRLHRTNDSYVALKCLLTI 342
           SRATA+  I +L  RL  T+DS VA+KCL+ +
Sbjct: 65  SRATAASAIEALMDRLQSTHDSSVAVKCLIIV 96


>gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]
          Length = 351

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/88 (38%), Positives = 45/88 (51%)
 Frame = +1

Query: 79  DLIGIVKDXXXXXXXXXXXXXXXXXXHVAVLRXXXXXXXXXXXXXXLATLLSLGNSSRAT 258
           DLIGI+KD                  H+A+LR              LATLLS G+ SRAT
Sbjct: 2   DLIGIIKDKASQSKAALISNPRTLSLHLALLRATTHDPFSPPDPTHLATLLSFGHCSRAT 61

Query: 259 ASILIHSLFHRLHRTNDSYVALKCLLTI 342
           AS  + ++  RL  T D+ VA+KCL+T+
Sbjct: 62  ASTAVDAIMDRLQTTRDASVAIKCLITV 89


>ref|XP_002284015.1| PREDICTED: putative clathrin assembly protein At4g40080-like [Vitis
           vinifera]
          Length = 336

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/90 (37%), Positives = 43/90 (47%)
 Frame = +1

Query: 73  MRDLIGIVKDXXXXXXXXXXXXXXXXXXHVAVLRXXXXXXXXXXXXXXLATLLSLGNSSR 252
           ++DLIG +KD                  HVAVLR              +A +LS G+ +R
Sbjct: 7   LKDLIGFLKDKASIIKASLLSKHNTSSIHVAVLRATTHDRAAPPPEYRIAAVLSFGHGAR 66

Query: 253 ATASILIHSLFHRLHRTNDSYVALKCLLTI 342
           ATA   I  L  RLH T ++ VALKCL TI
Sbjct: 67  ATACACIEGLMDRLHNTRNASVALKCLFTI 96


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