BLASTX nr result

ID: Atractylodes22_contig00013008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00013008
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...   184   2e-44
ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucum...   170   4e-40
emb|CBI26799.3| unnamed protein product [Vitis vinifera]              162   1e-37
ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glyci...   159   1e-36

>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score =  184 bits (467), Expect = 2e-44
 Identities = 129/310 (41%), Positives = 170/310 (54%), Gaps = 10/310 (3%)
 Frame = -1

Query: 901  SIRETISRAKPSESKHERTESVTQ-KYDTGHTKVKGGSLSNGLDA--STPSV-TQSGASR 734
            S++E + RAK  + + ERTESV+  K D  H KVKGGS  NG D   S PS  + +G SR
Sbjct: 1286 SVKEQVLRAKTVDGRLERTESVSLVKSDPVHAKVKGGSSVNGSDIQQSMPSAASHTGTSR 1345

Query: 733  LMESQKQIDDSGNRVLEDNAAKGAAKTSVDSEGRAVVKRSVPAASVSKQPRQDLVKGDTK 554
              E+Q+ +D+S NR L+++  K +++ S +SE RA  KRS+P+ S++KQP+ D+ K D+K
Sbjct: 1346 SGENQRPVDESTNRTLDESTVKVSSRASTESELRATGKRSLPSGSLTKQPKLDVAKDDSK 1405

Query: 553  P-KAVGRTSASAAAGDRDL--HTTESKQAGTAHDSATLLGHGNMSVSAKGSTPSTRSSDI 383
              K VGRTS S+ + DRDL  H  E +Q+G                              
Sbjct: 1406 SGKGVGRTSGSSTS-DRDLPAHQLEGRQSGV----------------------------- 1435

Query: 382  HGSELKAETGVSKVAESRNSSVKDDSAEAMDVQXXXXXXXXXXXXPDNALVSKSGDKPTK 203
                    T VS    +  S VKDD  E  D               DN+   KSGDK  K
Sbjct: 1436 --------TNVSSAGTADGSVVKDDGNEVSD--RAPSSRPIHSPRHDNSATIKSGDKQQK 1485

Query: 202  RTSPAEEQDRFIKRRKGEHDSRDLEPEVRFSDRER-LDPRAIDKHHPVDFDKLSSDEP-- 32
            RTSPAEE +R  KRRKG+ + RD E EVRFSD+ER +DPR +DK H VD DK  +DE   
Sbjct: 1486 RTSPAEEPERVNKRRKGDTEVRDFEGEVRFSDKERSMDPR-LDKSHAVDLDKSGTDEQGI 1544

Query: 31   IRSTDKPLDK 2
             R+TDKP D+
Sbjct: 1545 SRATDKPSDR 1554


>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
            predicted protein [Populus trichocarpa]
          Length = 1836

 Score =  177 bits (449), Expect = 3e-42
 Identities = 132/310 (42%), Positives = 176/310 (56%), Gaps = 10/310 (3%)
 Frame = -1

Query: 901  SIRETISRAKPSESKHERTESVTQ-KYDTGHTKVKGGSLSNGLDASTP---SVTQSGASR 734
            S RE ISRAK ++ + +RT++V+  K+D GH K KGGS +NG +A +    +    GASR
Sbjct: 1265 STREQISRAKHADGRSDRTDNVSHSKFDQGHQKSKGGSSTNGSNAQSAGSAAAVHVGASR 1324

Query: 733  LMESQKQIDDSGNRVLEDNAAKGAAKTSVDSEGRAVVKRSVPAASVSKQPRQDLVKGDTK 554
              E++K +DDS NR LED   + A K   +SE +   KR V     SK P+QD+VK D K
Sbjct: 1325 -SENRKGVDDSSNRTLEDGTVRAAPKNLAESEMKISTKRLV-----SKTPKQDVVKDDNK 1378

Query: 553  P-KAVGRT-SASAAAGDRDLHTTESKQAGTAHDSATLLGHGN-MSVSAKGSTPSTRSSDI 383
              KAVGRT S+S +  D  +H +E +Q G A+ S+ L  +GN +S S K ST STR+SD 
Sbjct: 1379 SGKAVGRTPSSSTSDKDIQVHLSEGRQGGAANVSSALTLNGNAVSTSGKISTLSTRASDS 1438

Query: 382  HGSELKAETGVSKVAESRNSSVKDDSAEAMDVQXXXXXXXXXXXXPDNALVSKSGDKPTK 203
            + ++      V K  +  +S   D+S  A                      SKS DK  K
Sbjct: 1439 YVAD------VQKPPQLVHSPRHDNSVAA----------------------SKSSDKLQK 1470

Query: 202  RTSPAEEQDRFIKRRKGEHDSRDLEPEVRFSDRER-LDPRAIDKHHPVDFDKLSSDE--P 32
            R SPAEE DR  KRRKG+ + RDLE EV+FS+RER  D R+       D DK+ +DE   
Sbjct: 1471 RASPAEEPDRSSKRRKGDGELRDLEGEVKFSERERSTDTRS------ADLDKVGNDEQNK 1524

Query: 31   IRSTDKPLDK 2
             RSTDKPLD+
Sbjct: 1525 HRSTDKPLDR 1534


>ref|XP_004142861.1| PREDICTED: THO complex subunit 2-like [Cucumis sativus]
            gi|449506883|ref|XP_004162874.1| PREDICTED: THO complex
            subunit 2-like [Cucumis sativus]
          Length = 1887

 Score =  170 bits (431), Expect = 4e-40
 Identities = 115/304 (37%), Positives = 178/304 (58%), Gaps = 11/304 (3%)
 Frame = -1

Query: 880  RAKPSESKHERTESVT-QKYDTGHTKVKGGSLSNGLDAS--TPSVT-QSGASRLMESQKQ 713
            R++ S+ + ++ + ++  K + GH K KG SL NG D+    PS +  SG+ ++++SQK 
Sbjct: 1292 RSRTSDVRTDKIDGLSVPKSELGHGKQKGMSL-NGPDSQPLVPSTSVHSGSLKMVDSQKP 1350

Query: 712  IDDSGNRVLEDNAAKGAAKTSVDSEGRAVVKRSVPAASVSKQPRQDLVKGDTKPKAVGRT 533
             DDS  R L++ ++K  +KTS +SE R   KRS P  S++K P+QD+ K + +       
Sbjct: 1351 GDDS-TRTLDEGSSKVVSKTSSESELRGSTKRSGPVTSLNKAPKQDITKDEIRSGKAASK 1409

Query: 532  SASAAAGDRDL--HTTESKQAGTAHDSATLLGHGNMSVS-AKGSTPSTRSSDIHGSELKA 362
            +  ++  +R+L  H T+  + G   +S +++ +GN   S  KGS+ + ++SD H  E KA
Sbjct: 1410 NPGSSTSERELPVHATDGGRHGGPSNSPSIMSNGNTQNSLTKGSSLTVKASDGHTIESKA 1469

Query: 361  ETGVSKVAESRNSSVKDDSAEAMDVQXXXXXXXXXXXXPDN-ALVSKSGDKPTKRTSPAE 185
            E+GV + ++ R SSVKDD  EA+DV              DN A  S+S DK  KR SPAE
Sbjct: 1470 ESGVGRTSDGRVSSVKDDGPEALDVSRSSSSRLGHSPRHDNSASGSRSSDKLQKRASPAE 1529

Query: 184  EQDRFIKRRKGEHDSRDLEPEVRFSDRER-LDPRAIDKHHPVDFDKLSSDEP--IRSTDK 14
            E DR  KRRKG+ + RD++ + R SD++R +DPR+ID       DK+  +E    R  DK
Sbjct: 1530 EPDRQGKRRKGDGEIRDVDGDFRISDKDRSMDPRSIDA------DKIGMEEQSGYRGLDK 1583

Query: 13   PLDK 2
            PLD+
Sbjct: 1584 PLDR 1587


>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score =  162 bits (410), Expect = 1e-37
 Identities = 119/309 (38%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
 Frame = -1

Query: 901  SIRETISRAKPSESKHERTESVTQ-KYDTGHTKVKGGSLSNGLDA--STPSV-TQSGASR 734
            S++E + RAK  + + ERTESV+  K D  H KVKGGS  NG D   S PS  + +G SR
Sbjct: 1260 SVKEQVLRAKTVDGRLERTESVSLVKSDPVHAKVKGGSSVNGSDIQQSMPSAASHTGTSR 1319

Query: 733  LMESQKQIDDSGNRVLEDNAAKGAAKTSVDSEGRAVVKRSVPAASVSKQPRQDLVKGDTK 554
              E+Q+ +D+S NR L+++  K +++ S +SE RA  KRS+P+ S++KQP+ D+ K D+K
Sbjct: 1320 SGENQRPVDESTNRTLDESTVKVSSRASTESELRATGKRSLPSGSLTKQPKLDVAKDDSK 1379

Query: 553  P-KAVGRTSASAAAGDRDL--HTTESKQAGTAHDSATLLGHGNMSVSAKGSTPSTRSSDI 383
              K VGRTS S+ + DRDL  H  E +Q+G  + S+                        
Sbjct: 1380 SGKGVGRTSGSSTS-DRDLPAHQLEGRQSGVTNVSS------------------------ 1414

Query: 382  HGSELKAETGVSKVAESRNSSVKDDSAEAMDVQXXXXXXXXXXXXPDNALVSKSGDKPTK 203
                  A T     A+ R S+VKDD  E  D               DN+   KSGDK  K
Sbjct: 1415 ------AGTADGSSADLRLSAVKDDGNEVSD--RAPSSRPIHSPRHDNSATIKSGDKQQK 1466

Query: 202  RTSPAEEQDRFIKRRKGEHDSRDLEPEVRFSDRERLDPRAIDKHHPVDFDKLSSDEPI-- 29
            RTSPAEE +R  KRRKG+ + RD E EVRFSD+E        +      DK   DE I  
Sbjct: 1467 RTSPAEEPERVNKRRKGDTEVRDFEGEVRFSDKESERYERDHRERLERPDKSRGDEMIAE 1526

Query: 28   RSTDKPLDK 2
            +S D+ +++
Sbjct: 1527 KSRDRSMER 1535


>ref|XP_003525215.1| PREDICTED: THO complex subunit 2-like [Glycine max]
          Length = 1829

 Score =  159 bits (401), Expect = 1e-36
 Identities = 117/311 (37%), Positives = 165/311 (53%), Gaps = 11/311 (3%)
 Frame = -1

Query: 901  SIRETISRAKPSESKHERTESVT-QKYDTGHTKVKGGSLSNGLDAST---PSVTQSGASR 734
            ++++   R K  + K ER ES+T  K D GH K+K  S+ NGLDA +   PS  QSG  +
Sbjct: 1277 TVKDQAIRTKTVDGKSERIESITVTKSDAGHIKLKSSSMVNGLDAQSSMAPSSVQSGMPK 1336

Query: 733  LMESQKQIDDSGNRVLEDNAAKGAAKTSVDSEGRAVVKRSVPAASVSKQPRQDLVKGDTK 554
             ME+ KQ+++S NR  +++  +        +E R   KRSVPA+S++K  +QD VK D +
Sbjct: 1337 SMENPKQVEESINRASDEHGTRS-------TELRTSAKRSVPASSLAKPSKQDPVKEDGR 1389

Query: 553  P-KAVGRTSASAAAGDRDL--HTTESKQAGTAHDSATLLGHGNMSVSAKGSTPSTRSSDI 383
              K V RTS S ++ D+DL  H  E +  GT + S                       D 
Sbjct: 1390 SGKPVARTSGSLSS-DKDLQTHALEGRHTGTTNISL----------------------DG 1426

Query: 382  HGSELKAETGVSKVAESRNSSVKDDSAEAMDVQXXXXXXXXXXXXPDNALV-SKSGDKPT 206
             G+E KAE GV+K ++ R S VKDD  +  D               +N +V SKS D+  
Sbjct: 1427 PGNESKAEVGVAKSSDIRASMVKDDGNDITDNPRGSSSRIVHSPRHENTVVTSKSNDRVQ 1486

Query: 205  KRTSPAEEQDRFIKRRKGEHDSRDLEPEVRFSDRER-LDPRAIDKHHPVDFDKLSSDEP- 32
            KR S  EE DR  KRRKG+ + RD E E+RFS+RE+ +DPR  D       DKL  +E  
Sbjct: 1487 KRASSVEEPDRLGKRRKGDVELRDFETELRFSEREKMMDPRFAD-------DKLGPEEHG 1539

Query: 31   -IRSTDKPLDK 2
              R++DKPL++
Sbjct: 1540 LYRASDKPLER 1550


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