BLASTX nr result

ID: Atractylodes22_contig00012994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012994
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   267   3e-69
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   262   1e-67
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   256   8e-66
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   249   6e-64
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62

>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  267 bits (682), Expect = 3e-69
 Identities = 130/253 (51%), Positives = 178/253 (70%)
 Frame = +3

Query: 3    SNLAAAYVKAGLHEKAESALRMLENEMGRPSQDAYHFLLTFYASLHNKVEIHRIWDVLKS 182
            SNLA  Y+KAG+ EKAESAL+ LE  MG  +++AYHFL++ YA   N  E++R+W +LKS
Sbjct: 250  SNLATIYLKAGIFEKAESALKKLEAIMGFRNREAYHFLISIYAGTGNSNEVNRVWGLLKS 309

Query: 183  SFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESNCSYYDTRLANVVISAYLRHGMVEE 362
            SF   +N SY VMLQALAKL+D++G+  CF EWES C+ YD R+ANV I  +L+H M EE
Sbjct: 310  SFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEE 369

Query: 363  AELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLALKCLETALAQAETSNWYPHSDSID 542
            AELIF  ++KR+ GPF +    FM  +L+  Q+DLALK +  A +++E   W P  ++++
Sbjct: 370  AELIFDDALKRTRGPFFKARERFMLFFLKIHQLDLALKHMRAAFSESEKHEWKPLQETVN 429

Query: 543  VFMKYFEKEGDVESAEKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIP 722
             +  YF  E DV+ AEKL KILK + CL+  +Y LLL+TY+AAG   P++RQR+E D I 
Sbjct: 430  AYFDYFRTEKDVDGAEKLSKILKHINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIE 489

Query: 723  ITPELEDLLKKVC 761
            I+ ELE LL+ VC
Sbjct: 490  ISDELEYLLESVC 502


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  262 bits (669), Expect = 1e-67
 Identities = 129/253 (50%), Positives = 173/253 (68%)
 Frame = +3

Query: 3   SNLAAAYVKAGLHEKAESALRMLENEMGRPSQDAYHFLLTFYASLHNKVEIHRIWDVLKS 182
           +NLA  YVKAG  +KAESAL+ +E ++ R  ++AYHFL+T YA   N  E++R+W+ LKS
Sbjct: 220 TNLATIYVKAGHFDKAESALKKVEEQIERDYREAYHFLITLYAGTSNLGEVNRVWNSLKS 279

Query: 183 SFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESNCSYYDTRLANVVISAYLRHGMVEE 362
           +F  T+N SY  ML  LAKL+D++GL  CF+EWES+C  YD RLANV I A L H M EE
Sbjct: 280 NFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHSYDMRLANVAIRACLEHDMYEE 339

Query: 363 AELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLALKCLETALAQAETSNWYPHSDSID 542
           A LIF  ++KR+ G F     +FM  +L+N Q+DLALK ++ A ++ +   W P   ++ 
Sbjct: 340 AALIFDDALKRTEGLFFNAREMFMVFFLKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVS 399

Query: 543 VFMKYFEKEGDVESAEKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIP 722
            F  YFE E DV  AE+L KILK +  LD   Y LLL+TY+AAG   P++RQR+E DGI 
Sbjct: 400 AFFAYFEDEKDVNGAERLCKILKHINRLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIE 459

Query: 723 ITPELEDLLKKVC 761
           I PELE+LL++VC
Sbjct: 460 INPELENLLERVC 472


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  256 bits (653), Expect = 8e-66
 Identities = 129/255 (50%), Positives = 181/255 (70%)
 Frame = +3

Query: 3    SNLAAAYVKAGLHEKAESALRMLENEMGRPSQDAYHFLLTFYASLHNKVEIHRIWDVLKS 182
            SNLAA YV A L EKAE AL+ LE EMG   + AYHFL++ YA ++N  E++R+W+ LKS
Sbjct: 254  SNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKS 313

Query: 183  SFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESNCSYYDTRLANVVISAYLRHGMVEE 362
            +F  T+N SY +MLQALA L D+DGLK CFEEW+S+C  +D RLANV + A+L   M+++
Sbjct: 314  AFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKD 373

Query: 363  AELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLALKCLETALAQAETSNWYPHSDSID 542
            AE I + +VKRS+GPF   L +FM H+L+ ++ID ALK +E A ++ + + W P  + + 
Sbjct: 374  AESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVL 433

Query: 543  VFMKYFEKEGDVESAEKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDGIP 722
             F+KYFE+E DVE AEK  KILK +  LD   Y LLLQT +AAG T+P++R+R++ D I 
Sbjct: 434  AFLKYFEEEKDVEGAEKFCKILKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIE 493

Query: 723  ITPELEDLLKKVCSE 767
            +  + +DLL++V  E
Sbjct: 494  V--DSKDLLQRVGPE 506


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  249 bits (637), Expect = 6e-64
 Identities = 127/257 (49%), Positives = 174/257 (67%), Gaps = 2/257 (0%)
 Frame = +3

Query: 3   SNLAAAYVKAGLHEKAESALRMLENEMGRPSQD--AYHFLLTFYASLHNKVEIHRIWDVL 176
           SNLA+ YVKAG  EKAE AL+ LE EM     D   YH L++ YAS  N  E++RIW+ L
Sbjct: 218 SNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLVYHCLISLYASTSNLSEVNRIWNAL 277

Query: 177 KSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESNCSYYDTRLANVVISAYLRHGMV 356
           KS +   +N SY VMLQAL KL+D++GLK  ++EWESNC  +D R+ N +I AYL+  M 
Sbjct: 278 KSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESNCRNFDLRIVNDIIGAYLQQDMY 337

Query: 357 EEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLALKCLETALAQAETSNWYPHSDS 536
           E+A +IF  + KRS GPF +   +FM ++L+ +Q+D A   LE+AL++++   W+P   +
Sbjct: 338 EDAAMIFEDATKRSKGPFSRAREMFMVYFLKLKQVDSAFSHLESALSESKEKEWHPSLAT 397

Query: 537 IDVFMKYFEKEGDVESAEKLFKILKRLKCLDDKMYCLLLQTYMAAGITDPDIRQRIERDG 716
              F+ YFE+E DVE AE   +ILKRLKCLD   Y LLL+TY+AAG   PD+R+R++ D 
Sbjct: 398 TTAFLNYFEEEKDVEGAEDFARILKRLKCLDASGYHLLLKTYVAAGKLAPDMRKRLKEDD 457

Query: 717 IPITPELEDLLKKVCSE 767
           I I+ ELE+LL  VC +
Sbjct: 458 IEISSELEELLGTVCPQ 474


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  245 bits (626), Expect = 1e-62
 Identities = 130/265 (49%), Positives = 173/265 (65%), Gaps = 13/265 (4%)
 Frame = +3

Query: 3    SNLAAAYVKAGLHEKAESALRMLEN--EMGRP-----------SQDAYHFLLTFYASLHN 143
            SNLA  YVKAGL +KAESALR LE   E GR             ++AYHFL++ YA   N
Sbjct: 209  SNLATIYVKAGLFDKAESALRKLEEQIECGRDCDFQKKRRHDADREAYHFLISLYAGTSN 268

Query: 144  KVEIHRIWDVLKSSFEATSNTSYRVMLQALAKLEDLDGLKSCFEEWESNCSYYDTRLANV 323
              E+HR+W+ LKSSF  T+N SY  +LQALAKL+D++G+  CF+EWES+C  YD  LANV
Sbjct: 269  LSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGILKCFKEWESSCHSYDMGLANV 328

Query: 324  VISAYLRHGMVEEAELIFHGSVKRSNGPFVQTLALFMKHYLRNQQIDLALKCLETALAQA 503
             I A L H M EEA  IF  ++KR+ G F +   +FM  +L+N Q DLALK ++ A ++A
Sbjct: 329  AIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQPDLALKHMKAAFSEA 388

Query: 504  ETSNWYPHSDSIDVFMKYFEKEGDVESAEKLFKILKRLKCLDDKMYCLLLQTYMAAGITD 683
            +   W P   ++  F+ YFE   DV+ AE+L KI K++  L+   Y LLL+TY AAG   
Sbjct: 389  KEIEWQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLNSNAYILLLKTYTAAGRLA 448

Query: 684  PDIRQRIERDGIPITPELEDLLKKV 758
            P++RQR+E D I I PELE+LL++V
Sbjct: 449  PEMRQRLEEDNIEINPELENLLERV 473


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