BLASTX nr result
ID: Atractylodes22_contig00012990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00012990
(260 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 108 3e-22
emb|CBI29825.3| unnamed protein product [Vitis vinifera] 107 1e-21
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2... 105 5e-21
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 102 3e-20
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 108 bits (271), Expect = 3e-22
Identities = 53/86 (61%), Positives = 64/86 (74%)
Frame = -3
Query: 258 LYTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEI 79
LYTIM++GL G+ DA LL +M GLVPDT YN LIKG+CD GLLDEA+SL LEI
Sbjct: 338 LYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEI 397
Query: 78 SEVNQSADSCTYTILISGMCKHGLVG 1
S+ + + +CTYTILI GMC+ GLVG
Sbjct: 398 SKNDCFSSACTYTILICGMCRSGLVG 423
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/78 (37%), Positives = 39/78 (50%)
Frame = -3
Query: 255 YTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEIS 76
YTI+I GLC + A+ L M G +PD+ YN L+ GFC G +DEA L
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293
Query: 75 EVNQSADSCTYTILISGM 22
+ D Y+ LI G+
Sbjct: 294 KDRYVLDKQGYSCLIDGL 311
>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 107 bits (267), Expect = 1e-21
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = -3
Query: 258 LYTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEI 79
LYTI+IRG C+ G V A +L DM GL PDT YN LIKGFCD GLLD+ARSL+LEI
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 78 SEVNQSADSCTYTILISGMCKHGLV 4
S+ + SCTYTILI GMC++GL+
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLL 427
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 107 bits (267), Expect = 1e-21
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = -3
Query: 258 LYTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEI 79
LYTI+IRG C+ G V A +L DM GL PDT YN LIKGFCD GLLD+ARSL+LEI
Sbjct: 343 LYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI 402
Query: 78 SEVNQSADSCTYTILISGMCKHGLV 4
S+ + SCTYTILI GMC++GL+
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLL 427
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = -3
Query: 246 MIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEISEVN 67
M+ LC+ G + A++LL + G+VPD YN LI GFC ++ A L E+
Sbjct: 500 MVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKG 559
Query: 66 QSADSCTYTILISG 25
S DS TY LI G
Sbjct: 560 HSPDSVTYGTLIDG 573
Score = 54.7 bits (130), Expect = 8e-06
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Frame = -3
Query: 255 YTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSL--KLE 82
YTI+I G+C G + +A ++ M +G P +N LI G C G L+EAR L K+E
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473
Query: 81 ISE-------VNQSA----DSCTYTILISGMCKHGLV 4
I + ++Q A D+ + ++ +C+ GL+
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510
>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
predicted protein [Populus trichocarpa]
Length = 789
Score = 105 bits (261), Expect = 5e-21
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = -3
Query: 258 LYTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEI 79
LYTIM++GL + G+V DA ELL +M G+VPDT YN LIKGFCD GLL EARSL+LEI
Sbjct: 338 LYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEI 397
Query: 78 SEVNQSADSCTYTILISGMCKHGL 7
S + + TY+ILISGMC++GL
Sbjct: 398 SRHDCFPNVKTYSILISGMCRNGL 421
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = -3
Query: 255 YTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEIS 76
Y ++I+G CD G + +A L +++ P+ + Y+ LI G C GL +A+ + E+
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433
Query: 75 EVNQSADSCTYTILISGMCKHG 10
++ + T+ LI G+CK G
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTG 455
>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 102 bits (255), Expect = 3e-20
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = -3
Query: 258 LYTIMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEI 79
LYTIMIRGL EGRV +A LL +M GL PDT YN LIKGFCD G LDEA SL+LEI
Sbjct: 340 LYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI 399
Query: 78 SEVNQSADSCTYTILISGMCKHGLV 4
S+ + ++ TY+ILI GMCK+GL+
Sbjct: 400 SKHDCFPNNHTYSILICGMCKNGLI 424
Score = 57.0 bits (136), Expect = 2e-06
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = -3
Query: 249 IMIRGLCDEGRVHDAFELLRDMNTIGLVPDTQAYNTLIKGFCDKGLLDEARSLKLEISEV 70
+M+ LC+ G + A++LL + G++PD + YN LI GFC G ++ A L E+
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555
Query: 69 NQSADSCTYTILISGMCKHG 10
DS TY LI G+ + G
Sbjct: 556 GHMPDSVTYGTLIDGLYRAG 575