BLASTX nr result

ID: Atractylodes22_contig00012972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012972
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   144   3e-32
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   140   6e-31
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s...   130   6e-28
ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-27
ref|XP_002525535.1| conserved hypothetical protein [Ricinus comm...   125   2e-26

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  144 bits (363), Expect = 3e-32
 Identities = 75/129 (58%), Positives = 99/129 (76%), Gaps = 1/129 (0%)
 Frame = +2

Query: 431 MKILKEDAGLLTNFEVLDFLRCRGAAKDATRVLAPLAPSELKVYDYLEQNAAACSQTRES 610
           MKI K +AG LTNFEVLDFLR RGAAKD TRV+AP+A SE KVYDYL + +AAC+QTRES
Sbjct: 1   MKIKKANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVE-SAACNQTRES 59

Query: 611 IVEFVTKCKPYKLTKSEIISIINIRPFTAAQIDP-LEDLNSRLGESAVEELIELIVQVFH 787
           I E + KCK Y L K+EI++IINIRP +  +IDP +E+   R+GE  +E+LIE+++ V  
Sbjct: 60  INELLEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGE-GIEDLIEMVITVLP 118

Query: 788 PSPDESKSK 814
           P P++  ++
Sbjct: 119 PPPNQMNTE 127


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  140 bits (352), Expect = 6e-31
 Identities = 74/131 (56%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
 Frame = +2

Query: 443 KEDAGLLTNFEVLDFLRCRGAAKDATRVLAPLAPSELKVYDYLEQNAAACSQTRESIVEF 622
           K +AG LTNFEVLDFLR RGAAKD TRV+AP+A SE KVYDYL ++AA C+QTRESI E 
Sbjct: 26  KANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAA-CNQTRESINEL 84

Query: 623 VTKCKPYKLTKSEIISIINIRPFTAAQIDP-LEDLNSRLGESAVEELIELIVQVFHPSPD 799
           + KCK Y L K+EI++IINIRP +  +IDP +E+   R+GE  +E+LIE+++ V  P P+
Sbjct: 85  LEKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGE-GIEDLIEMVITVLPPPPN 143

Query: 800 ESKSKVVEDII 832
           +  ++  E++I
Sbjct: 144 QMNTE--EEVI 152


>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Cucumis sativus] gi|449523065|ref|XP_004168545.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc9-like [Cucumis sativus]
          Length = 160

 Score =  130 bits (326), Expect = 6e-28
 Identities = 69/132 (52%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +2

Query: 431 MKILKEDAGLLTNFEVLDFLRCRGAAKDATRVLAPLAPSELKVYDYLEQNAAACSQTRES 610
           MKIL+ +AG LTNFEVLDFLR +GAAKD TRVLA + PSE KV+DYL Q  +AC+QTRE+
Sbjct: 1   MKILEANAGPLTNFEVLDFLRSKGAAKDPTRVLAKVLPSEYKVFDYLNQ-TSACNQTREA 59

Query: 611 IVEFVTKCKPYKLTKSEIISIINIRPFTAAQIDP-LEDLNSRLGESAVEELIELIVQVFH 787
           I+ F  K K Y L K+EI++IIN+RP T  ++ P +E+ ++R+GE A E + E+ + V H
Sbjct: 60  IINFAEKSKEYDLAKAEILNIINLRPTTPVELFPVIENCDARMGEGATERMEEIGLMVEH 119

Query: 788 PSPDESKSKVVE 823
             P        E
Sbjct: 120 VFPTPQNEPTFE 131


>ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|222855719|gb|EEE93266.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  128 bits (322), Expect = 2e-27
 Identities = 67/129 (51%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
 Frame = +2

Query: 431 MKILKEDAGLLTNFEVLDFLRCRGAAKDATRVLAPLAPSELKVYDYLEQNAAACSQTRES 610
           MKI   +AG LTNFEVLDFLR RGA++D +RVLAP+A SE KVYDYL +   AC+ TRE 
Sbjct: 1   MKIKNPNAGALTNFEVLDFLRSRGASRDVSRVLAPVAASEYKVYDYLVE-TPACNLTREK 59

Query: 611 IVEFVTKCKPYKLTKSEIISIINIRPFTAAQI-DPLEDLNSRLGESAVEELIELIVQVFH 787
           I EF+ +CK Y L K+E+++IINIRP    +I   +E+++SR     +EEL+EL+ +V  
Sbjct: 60  INEFLERCKKYDLAKAELLNIINIRPSQTVEIYTIIEEMDSRFEMPIIEELVELVEEVLP 119

Query: 788 PSPDESKSK 814
           P P + K++
Sbjct: 120 PPPGQPKAE 128


>ref|XP_002525535.1| conserved hypothetical protein [Ricinus communis]
           gi|223535214|gb|EEF36893.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  125 bits (313), Expect = 2e-26
 Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
 Frame = +2

Query: 449 DAGLLTNFEVLDFLRCRGAAKDATRVLAPLAPSELKVYDYLEQNAAACSQTRESIVEFVT 628
           +AG LTNFEVLDFL+ RGA KD++RV+AP+APSE KVYDYL     AC QTRE I EF+ 
Sbjct: 7   NAGALTNFEVLDFLKARGAGKDSSRVIAPVAPSEYKVYDYL-METPACRQTREQINEFME 65

Query: 629 KCKPYKLTKSEIISIINIRPFTAAQIDP-LEDLNSRLGESAVEELIELIVQVFHPSPDE 802
           KCK YKL K+EI++IINI P    ++DP +E    R G+  +EE+ +L+  +F P P E
Sbjct: 66  KCKAYKLAKAEILNIINIVPRELVELDPIIEKSEVRFGD-LLEEVKDLVCDIFPPPPGE 123


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