BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012971
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   125   3e-27
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   118   6e-25
ref|NP_001078783.1| RNA polymerase II, Rpb4, core protein [Arabi...   117   1e-24
ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidop...   117   1e-24
ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III s...   115   4e-24

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/88 (70%), Positives = 75/88 (85%)
 Frame = +2

Query: 5   MKILKEDAGLLTNFEVLDFLRGRGAAKDPTRVLAPLAPSEFKVYDYLAQNAAACSQTRES 184
           MKI K +AG LTNFEVLDFLR RGAAKDPTRV+AP+A SEFKVYDYL + +AAC+QTRES
Sbjct: 1   MKIKKANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVE-SAACNQTRES 59

Query: 185 IAEFVTKCKPYKLTKSEIISIINVRPST 268
           I E + KCK Y L K+EI++IIN+RP++
Sbjct: 60  INELLEKCKKYDLAKAEILNIINIRPAS 87


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/84 (69%), Positives = 71/84 (84%)
 Frame = +2

Query: 17  KEDAGLLTNFEVLDFLRGRGAAKDPTRVLAPLAPSEFKVYDYLAQNAAACSQTRESIAEF 196
           K +AG LTNFEVLDFLR RGAAKD TRV+AP+A SEFKVYDYL + +AAC+QTRESI E 
Sbjct: 26  KANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVE-SAACNQTRESINEL 84

Query: 197 VTKCKPYKLTKSEIISIINVRPST 268
           + KCK Y L K+EI++IIN+RP++
Sbjct: 85  LEKCKKYDLAKAEILNIINIRPAS 108


>ref|NP_001078783.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|332010295|gb|AED97678.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
          Length = 106

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/88 (65%), Positives = 74/88 (84%)
 Frame = +2

Query: 5   MKILKEDAGLLTNFEVLDFLRGRGAAKDPTRVLAPLAPSEFKVYDYLAQNAAACSQTRES 184
           MKI+K +AG LTNFEVLDFL  RGA+KD TRV+AP+A SE+KVYDYL + AA+ +QTRES
Sbjct: 1   MKIVKANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAAS-TQTRES 59

Query: 185 IAEFVTKCKPYKLTKSEIISIINVRPST 268
           I +F  KCK +KL K+EI++IIN+RPS+
Sbjct: 60  INKFADKCKDFKLAKAEILNIINLRPSS 87


>ref|NP_201100.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana]
           gi|334188590|ref|NP_001190602.1| RNA polymerase II,
           Rpb4, core protein [Arabidopsis thaliana]
           gi|32815911|gb|AAP88340.1| At5g62950 [Arabidopsis
           thaliana] gi|110743157|dbj|BAE99470.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332010294|gb|AED97677.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
           gi|332010296|gb|AED97679.1| RNA polymerase II, Rpb4,
           core protein [Arabidopsis thaliana]
          Length = 139

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/88 (65%), Positives = 74/88 (84%)
 Frame = +2

Query: 5   MKILKEDAGLLTNFEVLDFLRGRGAAKDPTRVLAPLAPSEFKVYDYLAQNAAACSQTRES 184
           MKI+K +AG LTNFEVLDFL  RGA+KD TRV+AP+A SE+KVYDYL + AA+ +QTRES
Sbjct: 1   MKIVKANAGALTNFEVLDFLNSRGASKDTTRVIAPIARSEYKVYDYLVETAAS-TQTRES 59

Query: 185 IAEFVTKCKPYKLTKSEIISIINVRPST 268
           I +F  KCK +KL K+EI++IIN+RPS+
Sbjct: 60  INKFADKCKDFKLAKAEILNIINLRPSS 87


>ref|XP_004145392.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Cucumis sativus] gi|449523065|ref|XP_004168545.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           rpc9-like [Cucumis sativus]
          Length = 160

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/88 (65%), Positives = 72/88 (81%)
 Frame = +2

Query: 5   MKILKEDAGLLTNFEVLDFLRGRGAAKDPTRVLAPLAPSEFKVYDYLAQNAAACSQTRES 184
           MKIL+ +AG LTNFEVLDFLR +GAAKDPTRVLA + PSE+KV+DYL Q  +AC+QTRE+
Sbjct: 1   MKILEANAGPLTNFEVLDFLRSKGAAKDPTRVLAKVLPSEYKVFDYLNQ-TSACNQTREA 59

Query: 185 IAEFVTKCKPYKLTKSEIISIINVRPST 268
           I  F  K K Y L K+EI++IIN+RP+T
Sbjct: 60  IINFAEKSKEYDLAKAEILNIINLRPTT 87