BLASTX nr result

ID: Atractylodes22_contig00012930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012930
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
emb|CBI19307.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-20
ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containi...   101   6e-20
ref|XP_003615371.1| Pentatricopeptide repeat-containing protein ...    94   1e-17

>ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +2

Query: 2   SLSIKIGYESNLPVMNSIMYLYIKSGRFCEAKKLFDGLERVSLVTWNAMIAGHAQMMDVA 181
           SL+IK+G+ESNLP+ NSIMYLY+K G   EAKKLFD +E +SLVTWNAMIAGHA+MMD A
Sbjct: 295 SLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFA 354

Query: 182 ENSLVASRNGVTALDMFL 235
           ++ L A + G  AL +FL
Sbjct: 355 KDDLAAHQCGTEALSIFL 372


>emb|CBI19307.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +2

Query: 2   SLSIKIGYESNLPVMNSIMYLYIKSGRFCEAKKLFDGLERVSLVTWNAMIAGHAQMMDVA 181
           SL+IK+G+ESNLP+ NSIMYLY+K G   EAKKLFD +E +SLVTWNAMIAGHA+MMD A
Sbjct: 258 SLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFA 317

Query: 182 ENSLVASRNGVTALDMFL 235
           ++ L A + G  AL +FL
Sbjct: 318 KDDLAAHQCGTEALSIFL 335


>ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/77 (62%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   SLSIKIGYESNLPVMNSIMYLYIKSGRFCEAKKLFDGLERVSLVTWNAMIAGHAQMMDVA 181
           SLSIK+GY S++ + NSIMYLY+K G   EA+KLF+G+E ++LVTWNAMIAGHA+MMD+A
Sbjct: 290 SLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLA 349

Query: 182 ENSLVASRNGVTALDMF 232
           E+ + A ++G TAL MF
Sbjct: 350 EDDVAAHKSGSTALAMF 366


>ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  101 bits (252), Expect = 6e-20
 Identities = 48/77 (62%), Positives = 64/77 (83%)
 Frame = +2

Query: 2   SLSIKIGYESNLPVMNSIMYLYIKSGRFCEAKKLFDGLERVSLVTWNAMIAGHAQMMDVA 181
           SLSIK+GY S++ + NSIMYLY+K G   EA+KLF+G+E ++LVTWNAMIAGHA+MMD+A
Sbjct: 284 SLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLA 343

Query: 182 ENSLVASRNGVTALDMF 232
           E+ + A ++G TAL MF
Sbjct: 344 EDDVAAHKSGSTALAMF 360


>ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355516706|gb|AES98329.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 765

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/77 (55%), Positives = 62/77 (80%)
 Frame = +2

Query: 2   SLSIKIGYESNLPVMNSIMYLYIKSGRFCEAKKLFDGLERVSLVTWNAMIAGHAQMMDVA 181
           +L  K+GYESNL V NS++YLY+K G   EA++LF G+  V+LVTWNAMIAGHAQMM+++
Sbjct: 303 ALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELS 362

Query: 182 ENSLVASRNGVTALDMF 232
           +++L A + G+ AL++F
Sbjct: 363 KDNLSAYQKGIEALNLF 379


Top