BLASTX nr result

ID: Atractylodes22_contig00012908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012908
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521590.1| conserved hypothetical protein [Ricinus comm...   128   1e-27
ref|XP_003551944.1| PREDICTED: reticulon-like protein B8-like [G...   124   2e-26
ref|XP_003532073.1| PREDICTED: reticulon-like protein B8-like [G...   124   2e-26
ref|NP_850552.1| reticulon-like protein B8 [Arabidopsis thaliana...   124   2e-26
ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500...   124   2e-26

>ref|XP_002521590.1| conserved hypothetical protein [Ricinus communis]
           gi|223539268|gb|EEF40861.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 247

 Score =  128 bits (321), Expect = 1e-27
 Identities = 68/134 (50%), Positives = 87/134 (64%), Gaps = 3/134 (2%)
 Frame = -2

Query: 395 LSDKHQKHNSGSSFVEEKSHKVTSQFNKLFGRQKPIHHILGGGKSADVLLWRNKXXXXXX 216
           L+D   K  S  SF EE++  VT++F++LFGRQKP+HH+LGGGKSADVLLW         
Sbjct: 18  LADSVPKQKS-VSFFEEETSSVTARFHRLFGRQKPVHHLLGGGKSADVLLW--------- 67

Query: 215 XXXXXXXXXXXXXVLLWRNKTISASVLCGATAVWVLFEWLDYNFLPLVCFGLVICIIGQF 36
                            RNK ISASVL GATA+W+LFEWL+Y+FL LVC  LV+ ++ QF
Sbjct: 68  -----------------RNKKISASVLTGATAIWILFEWLNYHFLTLVCLALVLGMLAQF 110

Query: 35  IW---SRVLNRSPP 3
           +W   S ++NRSPP
Sbjct: 111 VWTNASGLVNRSPP 124


>ref|XP_003551944.1| PREDICTED: reticulon-like protein B8-like [Glycine max]
          Length = 243

 Score =  124 bits (311), Expect = 2e-26
 Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
 Frame = -2

Query: 377 KHNSGSSFVEEKSHKVTSQFNKLFGRQKPIHHILGGGKSADVLLWRNKXXXXXXXXXXXX 198
           K  S S F ++KS  V+SQ N+LFGRQKP+HH+LGGGKSADVLLW               
Sbjct: 21  KKKSVSFFEDDKSDSVSSQINRLFGRQKPVHHVLGGGKSADVLLW--------------- 65

Query: 197 XXXXXXXVLLWRNKTISASVLCGATAVWVLFEWLDYNFLPLVCFGLVICIIGQFIWSR-- 24
                      RNK ISASVL  AT VWVLFEWL+YNFL ++CF LV+ ++ QF+WS   
Sbjct: 66  -----------RNKKISASVLTSATIVWVLFEWLNYNFLTILCFALVLVMLAQFLWSNAS 114

Query: 23  -VLNRSP 6
            + N SP
Sbjct: 115 GMFNSSP 121


>ref|XP_003532073.1| PREDICTED: reticulon-like protein B8-like [Glycine max]
          Length = 243

 Score =  124 bits (311), Expect = 2e-26
 Identities = 65/127 (51%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
 Frame = -2

Query: 377 KHNSGSSFVEEKSHKVTSQFNKLFGRQKPIHHILGGGKSADVLLWRNKXXXXXXXXXXXX 198
           K  S S F ++KS  V+SQ N+LFGRQKP+HH+LGGGKSADVLLW               
Sbjct: 21  KKKSVSFFEDDKSDSVSSQINRLFGRQKPVHHVLGGGKSADVLLW--------------- 65

Query: 197 XXXXXXXVLLWRNKTISASVLCGATAVWVLFEWLDYNFLPLVCFGLVICIIGQFIWSR-- 24
                      RNK ISASVL  AT  WVLFEWL+YNFL ++CFGLV+ ++ QF+WS   
Sbjct: 66  -----------RNKKISASVLACATIAWVLFEWLNYNFLTILCFGLVLVMLAQFLWSNAS 114

Query: 23  -VLNRSP 6
            + N SP
Sbjct: 115 SMFNSSP 121


>ref|NP_850552.1| reticulon-like protein B8 [Arabidopsis thaliana]
           gi|332641360|gb|AEE74881.1| reticulon-like protein B8
           [Arabidopsis thaliana]
          Length = 267

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
 Frame = -2

Query: 380 QKHNSGSSFVEEKSHKVTSQFNKLFGRQKPIHHILGGGKSADVLLWRNKXXXXXXXXXXX 201
           QK+  GSSF E++   V+S+FN+LF RQKPIHH+LGGGKSADVLLW              
Sbjct: 43  QKNKHGSSFFEQED-SVSSRFNRLFDRQKPIHHVLGGGKSADVLLW-------------- 87

Query: 200 XXXXXXXXVLLWRNKTISASVLCGATAVWVLFEWLDYNFLPLVCFGLVICIIGQFIWSRV 21
                       RNK ISASVL GATA+WVLFEW++++FL LVC+ L++ +I QF+WS  
Sbjct: 88  ------------RNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNA 135

Query: 20  ---LNRS 9
              LNRS
Sbjct: 136 SGFLNRS 142


>ref|XP_003519525.1| PREDICTED: uncharacterized protein LOC100500122 [Glycine max]
          Length = 245

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/120 (51%), Positives = 78/120 (65%)
 Frame = -2

Query: 380 QKHNSGSSFVEEKSHKVTSQFNKLFGRQKPIHHILGGGKSADVLLWRNKXXXXXXXXXXX 201
           +K  SGS F E+KS  V+ QFN+LFGRQKP+HHILGGGKSADVLL               
Sbjct: 20  EKQKSGSFFEEDKSSSVSYQFNRLFGRQKPVHHILGGGKSADVLL--------------- 64

Query: 200 XXXXXXXXVLLWRNKTISASVLCGATAVWVLFEWLDYNFLPLVCFGLVICIIGQFIWSRV 21
                      WRNK ISASVL  ATA+WVLFEWL+YNF+ ++ F + + ++GQF+W+ V
Sbjct: 65  -----------WRNKKISASVLSAATAIWVLFEWLNYNFITILFFVVALGMLGQFLWTNV 113


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